Pseudochaenichthys georgianus (South Georgia icefish): 117445770
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Entry
117445770 CDS
T09629
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117445770
04121 Ubiquitin system [BR:
pgeo04121
]
117445770
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117445770
Membrane trafficking [BR:
pgeo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117445770
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117445770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
C1_2
zf-RING-like
HypA
zf-Nse
zf-RING_Vps41
DZR_2
Prok-RING_1
Zn_ribbon_6
VPS18_RING_C
zf-HC5HC2H
DZR
PHD
Motif
Other DBs
NCBI-GeneID:
117445770
NCBI-ProteinID:
XP_033937525
LinkDB
All DBs
Position
4:complement(8006444..8017949)
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AA seq
319 aa
AA seq
DB search
MAEAPPWPSRFFCHRCSAEISPRLPEYTCPRCDSGFIEELLEERSADNGSTSTISSAPQN
QQPFENPDQHMFTFPSGYGQFALGVFDDRFDFGAGLGTEDNRDAENRRERETTSRQRYGA
RQPRSRHGSRRQAGRPEGVPTLEGIIQQLVNGIIAPTAMPNIGVGPWGVLHSNPMDYAWG
ANGLDAIITQLLNQFENTGPPPADRDKIKTLPIVHITEDHVASGLECSVCKDDYSVGEIV
RQLPCNHMFHNDCIVPWLEQHDTCPVCRKSLSGQNTATNPPELSGMNFTPSSSSSSASSS
SSTPQSSSSTSNENSTDNS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcctccatggcccagccggttcttctgtcacagatgctccgcagagatt
agtcctcggcttcccgagtacacatgtccaagatgtgattcagggtttattgaggaactg
ctggaggagagaagtgctgacaatggctccacgtctaccatttccagtgccccccagaac
cagcaaccatttgagaatccggaccagcacatgtttacattcccttcgggctacggccag
tttgccctgggtgtcttcgacgaccgcttcgacttcggtgctgggctcggaacagaggac
aacagggacgcagaaaacaggcgagaaagggaaacgacatcacggcaacgatatggtgct
aggcaaccaagaagtcgtcatggctcaaggcgacaagcagggaggccagagggagttccc
actttagagggaatcattcagcaactggtgaatggaataattgcacccactgcaatgcca
aatattggtgttggaccctggggtgttcttcactcaaatcctatggattatgcctggggt
gctaatggactagatgcaattataactcagttattaaaccagtttgagaacacgggtcct
ccgcctgctgacagggataaaataaaaacccttcctatagttcatattacagaggatcac
gttgcttcaggactggaatgttcagtgtgtaaagacgattacagtgtcggagagattgtg
aggcagctcccatgcaatcacatgttccataatgactgcatagtcccctggctggaacag
catgacacttgtccagtgtgcaggaaaagcttgagtggacagaacacggcaacaaaccct
ccagaactatcagggatgaactttaccccctcctcctcttcctcctccgcctcttcatct
tcctctacacctcagtcctcgagttcgaccagcaatgagaactccactgataactcatag
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