Pseudochaenichthys georgianus (South Georgia icefish): 117445802
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Entry
117445802 CDS
T09629
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117445802 (sox2)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117445802 (sox2)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117445802
NCBI-ProteinID:
XP_033937572
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All DBs
Position
4:complement(26161476..26164487)
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AA seq
319 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGPGNNTSGNGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGGNGMGSGVGVGGGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQLSYQ
HPGLNAHNPSQMQSMHRYDMSALQYNSMTGSQGYMNGSPTYSMSYSQQSTPGMTALGSMG
PSSVVKSESSSSSPPVVTSSSHRAGPGCQSGDLRDMISMYLPGADVSEQNAQTRLHMSGH
YQSTVPGTTINGTLPLTHM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagccccctgctccccaaaccaacacggggggc
ccgggcaacaacacgtccggaaacggacccaaccagaaaaacagtccggagcgggtcaag
agacccatgaacgcgttcatggtgtggtcccggggccagaggaggaagatggcgcaagaa
aaccccaaaatgcacaactcggagataagcaagaggctgggcgccgagtggaaacttctg
tccgagagcgagaagagacctttcatagacgaagccaagaggctgagggccctgcacatg
aaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaagaag
gacaagtacaccttgcccggtgggctgctggctccgggaggaaacgggatgggatctggg
gtcggtgtggggggcgggctaggcggtggggtgaaccagcggatggacagctacgcagca
cacatgaacggctggaccaacgggggctacggcatgatgcaggaccagctgagctaccag
cacccggggctgaacgcgcacaacccgagccagatgcagtccatgcaccgctacgacatg
agtgcgctgcagtacaacagcatgacaggctcccagggctacatgaacggctccccgaca
tactccatgtcctattcccagcaaagcacgcctgggatgaccgccctgggctccatgggg
ccctcctcggtggtgaagtccgagtcaagcagctccagccctcccgtcgtcacttcgtcg
tcccaccgggccggcccgggctgccaaagcggggatctgagggacatgatcagcatgtac
ctgcccggggcggatgtcagcgagcagaacgcccagaccaggctacacatgtccggccac
taccagagcaccgtgcccgggacgacgatcaacggcacgctgcccttaacacacatgtaa
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integrated database retrieval system
