Pseudochaenichthys georgianus (South Georgia icefish): 117445905
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Entry
117445905 CDS
T09629
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117445905 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117445905 (fip1l1a)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117445905 (fip1l1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117445905
NCBI-ProteinID:
XP_033937740
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All DBs
Position
4:complement(11600455..11626073)
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AA seq
370 aa
AA seq
DB search
MSSSELESTDSPVSEDEEGKIYQLIYDLIPANDKEGKEDVQISSGDIPVPLKTDAERSAP
HTVAYNDTRALYLEELSYFEETPALNGDTESSAERPWRLSGADITDYFNYGFDEEIWKMY
CKKQAEVHAANGKLYLGQKGHTRPSSGSSASRQPSVIGGKRGSSRRGRGHHSQDVTGMSP
EADRFSYNGPSPSNCNYLFAFTNPSPYLYRRGPPALSSLDSRHSKGFDDPSTSKPCSSGV
SYLIPRNMTLKAGVREAAKAWEFILRQEESENSRERSRKRSLAKGRRRVRDKNRGKCSSS
HSGKERNEEERKHSCHSSERVSERPRESSHRDNSEGKKKSSRSSRGSTSKRDGGEDRESQ
SRNKNKKANK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcggagttggagtccaccgacagccctgtcagcgaagacgaagagggaaag
atataccaattgatctatgacctgatccccgcaaatgacaaggagggaaaagaggacgtt
caaatcagctctggggatatacctgttcctctgaaaactgatgctgaacgcagtgcacct
catacagttgcttataatgacacaagggcgctatacctggaagagttgagctatttcgag
gaaaccccagcactgaatggagacactgagtcttcagcggaaaggccatggaggttatct
ggtgctgacatcacagattactttaactatggttttgatgaagaaatctggaaaatgtac
tgcaaaaaacaggcagaggtccatgcagctaatggaaaactatacctgggccagaagggg
cacactagaccttcctcgggtagctcagcttccagacagccaagtgtgattggaggaaaa
cgtggatccagccgcagagggagaggacaccattctcaggatgttactgggatgtcccct
gaagcggatagattttcttataatgggccctctccgtccaactgcaactatctctttgca
tttaccaatccatcaccttacctttaccgtagaggacccccagctctgtcttcattggac
agtcgacactctaaaggctttgacgatccctctacttcgaagccatgttcttcaggtgta
tcatacttaatcccaagaaatatgaccctcaaggctggggtgcgtgaagctgccaaggcc
tgggaattcatattacgccaggaagagtctgaaaacagcagagagagatccaggaagcgt
agccttgctaaaggcagaagaagagtcagagataaaaacagagggaaatgttcctcttca
cacagtggaaaagagaggaatgaggaggagcgaaagcacagctgccacagttctgaaagg
gtcagtgagaggcccagagagagcagtcacagagacaacagcgaaggaaagaaaaaatca
tcacgcagcagcagaggcagcacgagcaagagggacggtggtgaggacagagaaagtcag
agtagaaacaaaaacaaaaaggccaacaaatag
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