Pseudochaenichthys georgianus (South Georgia icefish): 117445955
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Entry
117445955 CDS
T09629
Symbol
rfx2
Name
(RefSeq) DNA-binding protein RFX2 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117445955 (rfx2)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Other basic domains
RF-X
117445955 (rfx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
HisKA
Motif
Other DBs
NCBI-GeneID:
117445955
NCBI-ProteinID:
XP_033937802
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All DBs
Position
4:20703667..20727747
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AA seq
744 aa
AA seq
DB search
MQSSEGGSDTTTSVAALRTSSSAQAPVVQPVPASQQRVLVQATGSAQKGGQAQQLSVPRV
QQVSQQVQQVQHVYPSQVQYVGESGETVYTNGTIRTAYSYNPEAQLYGQGSGGPYFDSQA
GGAHVTTVVSSASGGVAPHGMVGIAMDVGSSHIISSGSTYLIHGGSMEGSRNHISHSSRS
SSAMLEMAIENLQKSEGIASHKSSLLNSHLQWLLDNYETAEGVSLPRCSLYNHYLRHCQE
QKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDTQYMAM
RQQPVHQKQRFKPLQKVDGMSDSLCGSSQNCSSTPEQSVAAQSQHHQQYIDTSHNLPPFP
SPDLGTQPLPERINMNDIKKLQTLYREHCEATLDVVMNLQFHYIEKLWQTFWYSTPPSSD
GNTSISNSDDDLDGVIPREKLLALCKYEPIRLWMRSCDHILYQALVEILIPDVLRPVPST
LTQAIRNFAKSLETWLTNAMTNFPQEIIRTKVAVVSAFAQTLRRYTSLNHLAQAARAVLQ
NTSQINQMLSDLNRVDFANVQEQASWVCQCDESVVQRLEQDFKVTLQQQSSLDQWATWLD
NVVSQVLKPHQGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYM
FYLVEHRVAQATGETPIAVMGELFCSVSSQFSDLTSMMPSLMEKDASFSDEMSDLGSDAD
ASRGPTEPAVKRERIELSHPLQEM
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctccgagggagggtcagacaccacgaccagcgtggcagcgctgcggacgtca
tcatcagctcaggcccctgtggtacagcctgttccagcctcccagcagagggtgctggtt
caagctacaggctcagctcagaaaggaggacaagcacagcagctttcagtacccagggtt
caacaagtctctcagcaggttcagcaggtgcaacatgtctacccatcccaagtccaatat
gtaggagaaagcggagagactgtttacaccaatggaactatccggacagcctactcctac
aaccccgaggcccagttgtacgggcagggcagcgggggcccctactttgactcgcaggcg
ggtggagctcatgtcaccacggtggtctcctctgccagtggtggggtggcccctcacggc
atggtgggcattgctatggatgtgggcagcagccacatcatttccagcggaagcacctac
ctgattcatggtggaagtatggaggggagccgcaaccacatatcacactcatcacgctca
tcctccgctatgcttgaaatggcgattgaaaacctccaaaagtctgaaggaattgcaagt
cacaaaagcagcctgctcaacagccatctgcagtggctgctggacaactacgagacagcg
gagggggtgagcctgccgcgctgctccctatataaccattacctgaggcactgtcaggag
cagaagctggacccggtcaacgccgcctccttcggaaagctcatccgctcggtcttcatg
ggcctgaggacacgccgcctcggcaccagaggcaactctaagtatcattactatggcatc
cgggtgaagcctgactcaccgctcaaccggctgcaggaagacacccagtacatggccatg
aggcagcagcctgtccaccagaaacaaaggttcaaacctctgcagaaggtggacggtatg
tctgacagcctgtgtgggagctctcagaactgtagcagcactccagagcagtccgtggct
gctcagagccaacaccaccagcagtacatcgatacgtcccacaacttgcctccatttccc
tctcctgacttgggcacccagcctctgcctgagcgcatcaacatgaatgatatcaagaag
ctgcagacgctctacagagaacactgcgaggccactctggatgtggtgatgaacctccag
tttcactacattgagaaactctggcagaccttttggtattcaacaccgccatctagtgac
ggaaacacctccatctccaacagtgacgatgacctggacggtgtgatccccagagagaag
ctgctggctctgtgtaaatatgaaccaatcagactgtggatgaggagctgcgaccacatc
ctgtaccaggctctggtggagatcctcatccctgatgtgctgcgtcctgttcccagcact
ctcactcaagccatccgcaacttcgccaagagtctggagacctggctgaccaacgccatg
accaacttccctcaggagatcattcgcaccaaggtggcggtggtcagtgcgttcgcccag
accctgaggcggtacaccagtctgaaccacctggcccaggcggcccgcgccgtgctgcag
aacacctcccagatcaaccagatgctctccgacctcaaccgggtggacttcgccaacgtc
caggagcaggcctcatgggtgtgtcagtgtgacgagagtgtggtccagcgcctggagcag
gacttcaaggtgacgctgcagcagcagagctctctggaccagtgggccacctggctggac
aacgtggtgtctcaggtcctgaagccccaccagggcagccccagcttccccaaggctgca
cgccagttcctgctcaagtggtccttctacagctccatggtgatcagagacctgaccctg
cggagtgcagcgagtttcggctcgttccacctgatccgcctgctttatgacgagtacatg
ttctatctggtggagcaccgtgtggcgcaggcaaccggagagactcctatagccgtcatg
ggagagttgttttgttccgtttcatcacagttcagtgacttgacctccatgatgccatca
ctcatggaaaaagacgcgtccttctccgatgagatgagtgacctgggcagtgatgctgac
gcgtccagagggccgactgagccggccgtaaagagagagaggatcgagctgagccaccct
ctgcaggagatgtga
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