Pseudochaenichthys georgianus (South Georgia icefish): 117446020
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Entry
117446020 CDS
T09629
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117446020 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117446020 (tprb)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117446020 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
117446020
NCBI-ProteinID:
XP_033937930
LinkDB
All DBs
Position
4:complement(20804548..20826369)
Genome browser
AA seq
2380 aa
AA seq
DB search
MAALLLQELEPSEISKLSKTVQNKLEKVFSDQQYDIDSLKAQQEQFRVDSEQHFFEKVKQ
LAQCQEKCLSTTQEHLKLKDEFTKQVEDVKSLREKNREYESLQERLSSEQTLLSKAKEEL
EAEKRELLRTLEKRSLQVEHLNDDFRQLNDKLAEVNTSKMALQIKLDELESAEVNIKYKE
KRMEQEKVLLNGQTSWLNGELKAKSEELLSLSRQKGNDILELKCNLENKEDELNRLKDQV
ASLKSSNEQLQKQNEDMISKLREAKEQQATMEEKYRNELNANIKLSNLYKGATADSEAKS
DELTLAVEELHKLLKDAGEANQALEEKLQDMNGATDKSVAELNERIQVLEKELDNTNELL
SSSTLRGPISSASVISEEQLTTMSPTAAAVSKIKPGMRLTELYTAYLESQEHLQLERLEN
KRVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVASLSAKLEHAVMEVHRLQKEADEAN
KRSSVLERDNQRSELQLGDMAQQVRVLLIELEEARGNYVPHEDDGSSADVSSTSEVISQH
LVTFRGVEELQKQNQRLLVALRELSEAQEKEEIETSGSKRGELEQSLGKAQVELESLREQ
RGQQIKMTESIVRQRDMYRVLLAQATGVSFPQQGTPPEDFSLTSTPGRSPAAIPTSGTPT
ALVSMTTDSTEALEAKAALRQLQEVFSTYKKERMESDKLVTGQGEKLQEQLSDLHSQNAK
ISTQLEFASKRYEMLQDNVERYRKEIASLREREQKTAAAAQKHEQTIHSLNEDLRAAKEK
LSMAEGHAQSMRKERDMLKLVESRLNQEKESLQSQQQSQNMLMTNLHAIQATLERSETDT
RQRLSDQLEKQEREISQLQKRLESEVEQRHLLSRNQEIHLMDAKRQLEIQAPLHQKTKEL
LNAAEFELKTLRMQLGSSEVRHSLSSPSTPVLRGLPGSDQDREELEGRLRLAEAQAEELA
ESLRAATSSMEQYRAMAHSMEESLDKEKKVTEQARSSIETRLKEAEKQHQKLEEKLLEAE
KEKQNSEDQKRRALATLEEQMESLRRSLSSAQAEHQAVLQRVAVAEAQQQQALQDSLEQA
KLAAEAQDKYEQEMLLHAADVEALQTAKAQALQAVDLRLQLDERSQRVGAELLEARVSWE
EQEKIIKEEMAKMESRHDELQKQNTLLHEQIQTMSRKMADTLQRAINESPMNISLTDEGK
SQDQVLEILRFVRREKEIAESRFEVAQGETLRHRLRVEHLERELKEMQDSLSAAKERMQV
TAKTLAQHDELMKKTETMSILMETNKMLREEKNKMELELQQTQAKLQKLQSDIMPLQQAN
SELSEKSGMLQAEKKILEEDIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEVHLKRIQQL
TEESTRLKVEVARTNTLTVSLQSQIQNVRDNMSKINEERNTLKKEVEAKNQELLEKVRTI
TQVKKIGRRYKTQYDELKVEHDKLVAEAAAGPSQEEEARQASVQELQSLRDSLSQAEAKT
KELEGQLENINKVVTERETEGRNTQEQASRLQAELTRLRQELQDKSTQEETLRQQMTEKE
DKTRKAIVYAKQKINHLTNSKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLRGQQERQEQRDEPAEAGPSKTQEQQRSTDQRQISLKTTPAADRGSASTSEPPTANIK
PTPVTTGSKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVENQEAMQSSEGP
PVEHVTVYGSASGSVRSSSPNVQTTLASPMLNVQQTQTQATAFVQPTQQQSVSHAEPANQ
EPPPVVIEATPSSQVEWPSTSSSSSVFGTVSATPGSSMSKRPREEEESTTMLNDTDSTQE
DTSRAPIPKKLRIIQIVGPEEEVLAGDSAEAEVPTDSQDGAEANQTEEFQELDEGDEGAG
SQSVMMEQEVTLSQSGTPEPLLHEVIVIVTDTESEEEQEDEDEEEEEQDYEEEEEEEEEE
DEEDEEEDEEEEDDGEMVEEGEDSNEGSGDGNEAYEVDDTEGADVTDPGTETEECLGASD
STQRPADSQTASFEGTAMEAFSTDQPITSSGSRMPQSPRRPTQQLPSRMSIALTSDLGPH
AQRNPVRRQSVGRVPQLTPGVQGTSQHFFVDDDSIVPCTPTLVVPHRSEGLDNSSQVAGV
PRFRFGFSDDSPQTSSSSHSDLGHLASQGGLGMFESPLFLAPHEEESGGRSVPTTPLQVT
APVNIFSEAQSDSTEHASQSVPIVSMSTPGGAGSVEDRDDALLEPDSDRPSGDMSGDSVV
SQGDVEESGQQSDKASLPSTSQEPPSRSADTSSAPLRPSRPGSSRQLQRWPEHRGGRMKR
GAACEVPRWPRGSRLSMNHNHHFSGQGFPSRGLHGRRFAR
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgctgcaggagttggaaccctctgagatttcaaagctatcaaaaacg
gttcaaaacaagctcgagaaggttttttcggatcagcagtatgacatcgattctttgaaa
gcgcaacaagaacagtttcgagttgacagcgagcaacacttcttcgaaaaagttaaacaa
cttgctcagtgccaagaaaaatgtttatccacgactcaagaacatcttaaactcaaagat
gagtttaccaagcaagtggaagatgttaagagcttgcgtgagaagaacagggaatatgaa
tctttgcaagagaggctgtcatcagagcagactttgctgtcaaaagccaaagaggaattg
gaggcagaaaagcgcgagcttttgaggacactggagaagagatccttacaagtggagcat
ttaaatgatgacttcaggcaactcaatgataagttggctgaggtcaacacctctaagatg
gcgctgcagattaagttggatgaacttgaatcggctgaagtcaacatcaaatacaaggag
aagcgtatggaacaagagaaggtgctgctgaatggccaaacatcttggctgaatggggaa
ttgaaggctaagagtgaggaactgctgtccctatcccgacagaagggaaacgacatcctg
gagctgaagtgcaacctggagaacaaggaagatgagttgaatagactcaaagaccaagtg
gccagtttgaagtcttcaaatgaacaacttcagaaacagaacgaggacatgatcagcaaa
ctaagagaagccaaggaacaacaagccaccatggaggaaaagtacagaaatgagctgaat
gccaacattaagctttccaatctatacaagggagcaacagcggattctgaggcaaaaagt
gacgagctgactctggcagtggaggaactgcataaactcctgaaggatgctggggaagcc
aaccaggctcttgaggagaagttgcaggatatgaatggtgccacagacaagagtgttgct
gagctaaatgagaggatccaggttctcgagaaagagctggacaataccaacgagctgcta
tcaagttccacacttagaggtcctattagttcagcatctgtgatatcagaagaacagctg
acaacaatgtctccaacagcagctgctgtgtccaaaatcaagcctggcatgaggctgaca
gagttgtatacagcgtatttggagagccaggagcatctgcagctggagcgattggagaac
aagcgggtcaacaagtacctggatgacattgtgcaggaagtggaagccaaagcccctatc
ctcaaacggcagagggatgaacatgagcgcatgcaaaagtcggtggcaagcctttctgct
aagctggagcacgctgttatggaagttcaccgtctgcagaaggaagccgatgaagctaac
aaacgctcgtctgttctggaaagagacaaccagagatctgaactgcagctaggagacatg
gctcagcaagtgcgtgtgctgctcatcgagctggaagaggctcgtggaaactatgtgcct
catgaggacgatgggagctcagctgatgtcagcagcacatcagaagtgatcagccaacac
ttggtgaccttccgcggtgtggaggagctgcagaagcaaaaccagcgtcttctggtggcc
ctcagggagctcagtgaggcccaggagaaagaggagattgagacctctggcagcaagcgt
ggtgaactggagcagagtttgggtaaagcccaggtagagctggagtctctgagggagcaa
cgcggccaacagataaagatgaccgagtccatcgtgaggcagagggacatgtaccgtgtg
ctgctggctcaggcaacaggagtcagcttccctcagcaaggcacaccacctgaggatttc
tccctgacctccacccccggacgctcaccagcagccattcccacctcaggaacacccact
gcacttgtctccatgacaacagattctactgaagccttagaagccaaggcagctttgcga
cagttgcaggaggtgttctccacctataagaaggagcgcatggagagtgacaagttagtg
actgggcagggcgagaagctccaggagcagctctcagacctccactcccagaatgctaag
atatccactcagctggagtttgcctccaagcggtatgagatgctgcaggacaatgttgag
cgctacaggaaagagattgcttccctcagagagagagaacagaagacggcagctgccgca
cagaagcacgagcagaccatacactctttgaatgaggatttgagagctgccaaagagaaa
ctatccatggctgagggccatgctcagagcatgcgtaaggagagagacatgctgaaactg
gtggagtccaggctgaatcaggagaaggagtcactgcagagccaacaacagagccagaac
atgctgatgaccaacctccatgccattcaggccactcttgagcgttcagagactgataca
cgtcagcgtttgagtgaccagttggagaagcaggaacgagagatctcccagctgcagaag
aggctggagagcgaggtggaacagcgccacctgctcagcagaaaccaggagatccatctg
atggacgcaaagaggcagctggagatacaggctccgttacaccagaagaccaaagagctg
ctgaatgctgcagagtttgagctcaaaaccctcagaatgcaactcggcagcagcgaagta
cgtcactccctgagctccccatccacgcctgttctcagaggcttaccaggttcagatcaa
gaccgagaggagctagagggccgcctgcggctggctgaagcccaagcagaggagctggca
gagagcctcagggccgccacctccagcatggagcagtacagagccatggctcacagcatg
gaggaatccctggacaaagagaaaaaggtgacagagcaggcacgctcgtccatcgaaacc
cgtttgaaggaggctgagaagcagcaccaaaagctggaggagaaacttctggaggcggag
aaagagaaacaaaattcagaggaccagaagagaagagccctggccactctggaggagcag
atggagagtctcaggaggagtctcagcagtgcccaggctgagcaccaggcggtgctgcag
cgcgtggctgtagccgaagctcagcagcaacaagctctgcaagacagcctggagcaggct
aagctggcagccgaagcgcaagacaagtatgagcaggagatgttgctgcatgcggccgac
gtggaggctctgcagaccgctaaggctcaggccctgcaggccgtggacctccgcctgcag
ctggacgagagatcccagagggtcggtgctgagctgctggaggccagggtctcctgggag
gagcaggaaaagatcatcaaggaggagatggcgaagatggagagccgtcacgatgagttg
cagaagcagaacactctcctgcatgagcagatccagaccatgagcaggaagatggccgac
actctgcagcgtgctatcaatgagagtcccatgaacatctccctgactgatgagggcaaa
tctcaagaccaagtcctcgagattctcaggtttgtgcgtcgggagaaggagattgcagag
tctcgttttgaggtcgcccaaggggagaccttgcgtcaccgcctgagggtggagcacctg
gaacgagagctgaaggagatgcaggacagcttgagtgccgcaaaggagaggatgcaggtc
acagcgaagaccctggcgcagcacgatgagctgatgaagaaaactgaaactatgagcatc
ctgatggagaccaacaagatgctgagagaggagaagaacaagatggagctggaacttcaa
caaactcaagcaaaattgcaaaagctgcagtcagacatcatgccactacagcaggccaac
tctgagctgagcgagaagagtggcatgctgcaggcggagaaaaagatactggaagaggac
atcaagcgctggaaagctcggacccagcatttggtgagccagcaaaaggattcggatcca
gaagagtacaagcgtctgcactcggagaaggaggtacatctgaaacgcattcagcagctc
actgaggagagtacccgactcaaagtagaggttgccaggacgaatactctcacagtgtct
ctgcaaagccagatacagaatgtgcgtgacaatatgagtaaaataaatgaagagaggaat
acactgaagaaagaagtggaggccaagaaccaggaactcctggagaaagtgcgaactatc
actcaggtcaagaaaattggacgtcgctacaagactcagtatgatgaactcaaggtggaa
catgacaagttggtggctgaggcggcagcaggcccatcccaagaagaggaggctcgtcag
gcctcggttcaggagctgcagagcctcagagactctctgagccaggctgaagcaaagacc
aaagagctagaggggcagctggagaacatcaacaaggtggttacggagcgtgagactgaa
gggcgaaacacccaggaacaggcctccaggctgcaggcagagctgaccaggctgaggcag
gagctgcaggataaatccactcaggaggaaacgctgaggcagcagatgactgagaaggag
gacaagaccaggaaggccatcgtttatgccaagcagaagatcaaccatctcacaaactcc
aaagaccagcttcagaaggaaaatgaggaactgaagcaacagcgtgaggagctggaggtg
cgagtgagtgctctcaagtctcaatacgagggccgcctgagtcgacaggagagagagctg
agagacctgcgaggccaacaggagagacaggagcagagagacgagccggccgaggcgggg
cccagcaagacccaggaacagcagaggagcacagaccagagacagatcagtctgaagacc
accccagcggcagacaggggcagtgccagcacatccgagcctccaacagccaacattaag
cccacacctgtgacgacaggcagcaagcagcctgtcaatcctgggaacaaacccactccg
agagctagcatccggcccatgattaccccagccactgtgcccacgccaacacccacggct
actgtcatgccaaccacacaggtggagaatcaggaagccatgcagagtagcgagggcccc
ccggtggagcatgtgacggtgtacggcagcgccagcggctcggtgcgctcctccagcccc
aacgttcagaccaccttagcgagccccatgctgaatgtgcagcagacccagacgcaggcc
acagcctttgtccaaccaactcaacaacaaagcgtgagccatgcagagccagccaatcag
gagccaccacccgtggtcatcgaggcaacacctagctcgcaggtggagtggccttcaacg
tcctccagctcctctgtgtttgggactgtttcagcaacgccagggagctccatgtcaaag
aggcctcgggaggaggaggagagcaccaccatgctcaatgacacagactccacccaggag
gatacctcccgggctcctatacctaagaagctacgcatcatccagatagtgggtccagag
gaggaggtgctggccggggacagtgctgaggctgaggtgccaacagacagtcaagacggt
gccgaagcaaaccagacggaggagtttcaagaactggacgaaggagatgagggtgctggc
tcccagtccgtcatgatggagcaagaggtcaccctgtcccaaagtggcacccctgaaccg
ctgctgcacgaagtaatcgtcatagtaacagacacagaaagtgaggaagaacaggaagat
gaggatgaagaggaagaagagcaggattacgaagaggaggaggaagaagaggaggaggaa
gatgaagaggacgaggaggaagacgaggaggaggaagacgacggagagatggtggaggaa
ggagaggacagtaacgagggcagcggagacggcaacgaggcctacgaagtagacgacaca
gagggagctgatgtaacggacccgggcacggagacagaggaatgtttgggggcgtctgac
tccacccagaggccggcagattcccagacagccagctttgagggcactgcaatggaggcc
ttctctactgatcaacctatcacaagctctggttctcggatgccccaatctccacggaga
ccaacacaacagctgccctctcgaatgagcatcgccctgacatcagacctgggaccacat
gctcagcgtaaccctgtccgtcgtcagtcagtgggaagagttcctcagctcacccccggg
gtgcagggcacttctcagcatttctttgttgatgatgacagtatagtgccctgcaccccc
actctggtggtgccgcaccgctcggaaggacttgacaattcttcacaagtagctggtgtg
cctcgcttcaggtttggtttttcagacgacagccctcagaccagctcgtcctcacactct
gacctgggacatctcgcatcacaaggaggtcttgggatgtttgaaagtcccttgttccta
gcacctcatgaagaggagtcgggtggacgcagcgttcccaccacaccattacaagttaca
gcaccagtaaatatcttctcagaggctcagtccgactccactgagcacgcctctcagtcg
gttcccatagtgagcatgtcaacgccaggaggtgccggctcagtggaggacagggacgac
gccctcctggagccagactctgatcggcccagtggagatatgtcaggagattcagtggtc
tctcagggggatgtggaggagtcaggtcaacagtctgacaaggccagcctcccctccacc
agccaggagcccccctccagatccgcagatacaagcagtgctccacttcgaccctccaga
cctggatccagcagacagctgcagcgctggcccgagcaccgtgggggccgcatgaagaga
ggagcagcctgtgaggtgccaaggtggcctaggggctcaaggctgtccatgaaccacaac
caccatttttctggtcagggatttccttctcggggtttacacggaagacgatttgcgaga
tga
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integrated database retrieval system
