Pseudochaenichthys georgianus (South Georgia icefish): 117446067
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Entry
117446067 CDS
T09629
Symbol
cacna2d3
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04260
Cardiac muscle contraction
pgeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117446067 (cacna2d3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117446067 (cacna2d3)
04261 Adrenergic signaling in cardiomyocytes
117446067 (cacna2d3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117446067 (cacna2d3)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117446067 (cacna2d3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
WAK_assoc
dCache_2
Caps_syn_GfcC_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117446067
NCBI-ProteinID:
XP_033937959
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Position
5:19697459..19730964
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AA seq
1173 aa
AA seq
DB search
MLGKWSLLFSHMCSSSSSLLLLWTLVGLDVVEVSGSHPGIPLSVVKLWASAFGGEIKSIS
AKYSGSQLLQKDLWAITAPRPGTNSSSEPGSPVKGRINPKNAACLAAWEESGGIRGSPRK
HGESFQTAYRKRLLGPNLGPPCTEKYKEPEKSVRVEEIDGVKLVKNLALKLEEVFWKKAE
ATRRLVEAAEEAHHQHEDNPDLQYEYFNAVLINEVDEEGNNVELGGEFLLEPNDHFNNLS
VNLSLSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVDNFERDSTLIWQYFGSAKGFFRQY
PGVKWHPDEHGVIGFDCRNRKWYIQAATSPKDVVILIDVSGSMKGLRLTIARQTVSSILD
TLGDDDFFNVIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLKKLFAKGIGLLGVALAE
AFTILNEFNQTGRGSLCSQAIMLVTDGATEMYDDVFEKYNWPERKVRIFPYLIGRESAFA
DNLKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALSQA
HKLKDKSGPSLMTTVAMPVFSTKNETKNQGILLGVAGTDIPLQELMKLIPKHMLGIHGYA
FAITNNGYILMHPDLRPLYQDGKKRRKPNYSSVDLSEVEWEDKDDILRNAMVKRRTGTFS
MEVKKTVDGGRRVLKMHNDYFYTDIKGTPFSVGVALSRGHGKYFFRGNVSVEAGLRDLEQ
PDVALADEWTYCNTEEQHEHRHLTQIQAIKMFMTGRRTHLKCDRELIQEVLFDAVVTAPL
DAYWTGLALNKSENSDKGVEIAFLGTRTGLSRTNLFVPADQLSNQDFLTAEEKEGVFNAD
HFPLWYKRAAEQVPGAFVYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLE
FFQRKFWTACRQCTALDGKCGISCDSADINCYLIDNNAFILVTEEPSQTGLFFGEVEGAV
MNKLLQMGSFKRITLYDYQALCREYAGSSDSARSLSNPFTVFKWLLTELVIFLLEFNLYS
WWNVDLSVKAQRPRGKTHMVPCDTEYPAFVSERTIKETTGNIDCEGCVRSFVIQQIPSSN
LFMVVVDNKCDCSSYPPVTMDPIEIMYNESLKCDRLKYQKDRKKPESCHPFHPEENAMEC
GSASRLSSPLAAALLPLVASTISRRHFRRAKDA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaagtggagcctcctgttctcgcacatgtgcagcagtagcagcagcctgctc
ctgctctggaccctcgtcgggctggatgtggtggaggtgtcggggtcacatccagggatc
cctctgtcagtcgtgaagctctgggcttctgcatttggtggagaaataaaatcaatttct
gcaaaatattctggatcccaactccttcaaaaggatctgtgggccatcacagcaccacgt
ccaggaaccaactccagctctgagcccggatccccggtcaagggcaggattaacccaaaa
aatgctgcatgtctcgcagcgtgggaggagagcggaggaatcagaggaagtccacgcaaa
catggggagagctttcaaacggcatatcgaaagcgactcctgggtccaaacctaggacct
ccttgcactgagaaatataaagaacctgaaaagtcagtcagagttgaagaaattgatggt
gtgaagctggtcaagaacctggctttgaagctggaggaagtgttctggaaaaaagcagag
gcaaccaggcggctggtggaggcggcagaagaagcgcaccatcagcatgaagataatccc
gacctgcagtacgagtacttcaacgccgtgctgatcaatgaggtggacgaggagggcaat
aacgtagagctcggcggagagttcctcctggagcccaacgaccatttcaataacctgtca
gtcaacctgagcctcagcgtggtgcaggtgccgaccaacatgtacaacaaagatcctgat
atagtgaacggagtttactggtccgaggctctgaataaagtatttgtggataattttgaa
agagactcaacgctgatctggcagtactttgggagcgccaaaggtttcttcaggcagtac
cctggagtaaagtggcatccagatgaacatggtgtgattggatttgactgtagaaacagg
aagtggtatattcaagcagcaacgtcccctaaagatgttgtcatcttaatcgatgtgagt
ggaagcatgaaaggactgaggctgaccatcgccaggcagacggtctcctccatattagac
acacttggagatgatgacttcttcaacgtcattgcatataatcaggagatccactatgtg
gagccttgtttgaatggcactctggtccgagccgacaggaccaataaagaccatttccgc
gaacatctgaaaaagctgtttgctaaggggatcgggctgctgggcgtcgctctggctgaa
gcgttcacaatcctgaatgaatttaatcaaactggacgtggcagtttgtgcagccaggcc
ataatgctcgtgactgacggggcgacagaaatgtatgacgacgtttttgagaagtacaac
tggccagaaagaaaggtgcgaatattcccatacctgattggacgagagtctgcatttgct
gataacctcaagtggatggcttgtgccaacaaaggatatttcagtcagatctccacgcta
gcagatgttcaggagaacgtgatgagatatctgcacgtcatgagccgcccgaaagtcatc
gaccacgagcacgacacggtgtggactgaagcttacgtggacagtgctctttcccaggct
cataagttgaaggacaaatcgggcccaagtctgatgaccacagtcgccatgcctgtcttc
agcacaaagaatgaaacgaagaaccaggggattctgttgggggttgcgggaacagacatc
cctctgcaggagctgatgaagcttatccctaaacatatgttaggaatccatgggtacgct
tttgctatcacaaacaatggctacatcctgatgcacccggacctcaggcctttgtatcag
gatggcaagaagaggaggaagcccaactacagcagcgtggatctctccgaggtggagtgg
gaagacaaagatgatattctacgaaacgctatggtgaaaaggaggacagggactttctct
atggaggtgaagaagacggtggatggagggaggcgtgtcctgaagatgcacaatgactat
ttctacactgacatcaaaggaacgccgttcagtgttggggtggccctctccagaggtcat
gggaagtacttcttcagaggaaatgtctcagttgaagccgggctccgtgatctggaacag
ccagatgtcgccctggcagatgaatggacttactgcaacacagaggagcagcacgagcac
cgacacctgacccagattcaagccatcaagatgtttatgacgggccgcagaacacacctc
aaatgtgacagagagctgatccaggaagtgttgtttgatgctgtggtcaccgctccgctg
gatgcctactggactggactggccctcaacaaatcagagaactcagacaaaggagtggag
attgccttcctgggtacgcgcaccggcctctcgaggaccaacctgtttgtcccggccgat
cagctgtccaatcaagacttcttgacggcggaggaaaaggagggtgtgtttaacgccgat
cacttccctctgtggtacaagcgagcggcagagcaggtccccggggcgtttgtgtactcc
atccccttcagcacagcgttagaaaataaaagtgtggtcttggccagcactgcaatccag
ctcctcgatgacagaaagtctccaatcgttgccgctgtagggatccagatgaagctcgag
ttctttcagaggaagttctggacggcctgcagacagtgtaccgctctggatggaaaatgt
ggcattagctgtgatagcgcggacattaactgctatctcattgacaacaatgccttcatt
ctcgtcacagaggagccctctcagacagggctcttcttcggagaggtggagggtgcagtt
atgaacaaacttctccaaatggggtccttcaaaaggatcacgctgtatgattaccaggcg
ctctgcagagagtacgctgggagcagcgacagtgcacgctctctatcaaatcccttcact
gtttttaagtggctcctgactgaacttgtcatttttctgctagaatttaacctgtacagc
tggtggaacgtggatctttctgtgaaagctcagagacctcgaggtaaaacccacatggtg
ccgtgtgacacagaataccctgcctttgtctccgaacgcaccatcaaagaaacaacaggc
aacatcgactgtgagggctgtgtcagatctttcgtcatacagcagattcccagcagcaac
ctcttcatggtggtagtggacaacaagtgtgactgcagcagttatcctccagttaccatg
gatcccatcgagatcatgtacaacgagtcactaaaatgtgacagactgaagtatcagaag
gacaggaagaagcctgaatcctgtcatcctttccaccctgaggaaaatgccatggagtgt
ggttcagcatcgcgcctctccagccctctagccgcagctctgctccctctggtagcatcg
accatcagcagaagacatttcagacgagcgaaagatgcatga
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