Pseudochaenichthys georgianus (South Georgia icefish): 117446092
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Entry
117446092 CDS
T09629
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b
KO
K14960
COMPASS component SPP1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117446092 (cxxc1b)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117446092 (cxxc1b)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
117446092 (cxxc1b)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
117446092 (cxxc1b)
COMPASS/SET1 complex (yeast)
117446092 (cxxc1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
MutS_IV
DUF7813
Motif
Other DBs
NCBI-GeneID:
117446092
NCBI-ProteinID:
XP_033937982
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Position
5:complement(6813884..6824314)
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AA seq
587 aa
AA seq
DB search
MDSEMSDLDHAPGPENSSMDGENAPLYCICRKADINCFMIGCDKCNEWFHGHCINITEKK
AKAIREWYCMKCKGKNPSLEIKYRTKKNREKEVEYDRGSDRGSDRQSDRQSDRQSDRQYS
TPSTPDYKSERRRGSKVKRSVRMCGECEPCKRTEDCATCDFCKDMKKFGGPNKIRQKCRF
RQCEVRARKMLRVKDEELALQERRENNYHRRRRYSDDYDSEAELYQKYKSSGNNNSMGWN
SDEEDEAPFSPVMRKKAVKVKHVKRREKKFDKKKESRRHKQKQKHKDKTRSSEKGELRDS
TGHRQCLGPSCVQPTRAGSKYCSEECGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKQ
LERIRRDQQNARLRLTEMERRFHELEGIIVKAKQQAAQLDEECNENDSEDTDLQIFCVSC
SHPINPKVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLC
PEHSRDPKIQGDEVCGCPLVKNVFELTGDYCRVPKRKCNKHYNWEKLRRAEVDLERVRVW
YKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPVTTDLRGIKDR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaaatgtctgaccttgaccatgcaccagggcctgagaacagcagcatggac
ggggagaacgcaccactgtactgtatctgcaggaaagcagacatcaactgcttcatgatt
ggctgtgacaagtgtaacgagtggttccacggccactgcattaacatcactgagaagaag
gcgaaggcaatcagagaatggtattgcatgaaatgcaaaggtaaaaacccctctctggaa
ataaagtacagaacaaagaaaaaccgagagaaggaggtcgagtatgacagaggatcggac
agaggatcggacagacaatcggacagacagtcggacagacagtcggacagacagtacagc
accccgagtactcctgactataagagtgaaaggcggcgtggatctaaagtgaagcgttca
gtgcgaatgtgtggggagtgtgagccgtgcaagaggacggaggactgcgccacgtgtgac
ttctgtaaggacatgaagaagttcggaggccccaacaaaatcaggcagaagtgcaggttc
aggcagtgtgaggtccgagccaggaaaatgcttcgtgtgaaagacgaggaattggctttg
caagaaaggagggaaaacaactaccacaggcggaggcgatactctgacgactacgacagc
gaggcggagctctaccagaagtacaagtcatcggggaacaacaacagcatgggatggaac
agtgatgaagaggacgaggcgcctttcagtcctgtcatgcgtaaaaaagccgtaaaggtg
aagcacgtcaagagaagagagaagaagtttgacaagaaaaaggagtcccggcggcacaaa
cagaagcagaagcacaaagacaaaaccagatccagtgagaagggcgagctgcgggacagc
acggggcaccggcagtgtctcgggccgagctgtgtgcagccgacgagagccggctccaag
tactgctctgaggagtgcggcatgaagctagccgccaaccggatctatgagatcctgcct
cagcgcatccagcagtggcagcagagcccctgcatcgccgaggagcacggcaagaagcag
ctggagcgaatccgccgcgaccagcagaacgcccggctgcgcctcacagagatggagcgg
cgcttccacgaactggaaggcatcatcgtcaaggccaagcagcaggcggcccagctggac
gaggagtgtaatgaaaacgacagcgaggacacagacctgcagatcttctgcgtgtcttgc
agtcatcccatcaatccaaaagtggcactgagacatatggagcgatgttacgcaaagtat
gagagccagacttcctttggctccatgtaccctacaaggatagaaggagcaacgagactc
ttctgtgacgtgtacaatccccaaagcaaaacgtattgtaagaggcttcaggttctgtgt
ccggaacattccagagaccctaagatccaaggggatgaggtgtgtgggtgtcctctggtg
aagaacgtgttcgagctgaccggagattactgcagggtccccaaaaggaaatgcaacaaa
cattacaactgggagaagctcaggagagcggaggtggacctggagcgagtccgggtgtgg
tacaagttggacgagctctttgaacaggagcgtaacgtcaggacggcgatgacgaacaga
gccggtctgctcgctctgatgcttcaccaaactattcaacacgaccccgtgaccaccgat
ctccgtggtatcaaggataggtag
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