Pseudochaenichthys georgianus (South Georgia icefish): 117446100
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Entry
117446100 CDS
T09629
Symbol
rbm12
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117446100 (rbm12)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117446100 (rbm12)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117446100
NCBI-ProteinID:
XP_033937992
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All DBs
Position
5:complement(33532024..33541226)
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AA seq
901 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGAIKGLKVSLLLSSKTEMQNMIELSRRRFEAGAGAGETAAPTAGHAHRQAGTIPIPTVQ
QGTGGRSSSHGNQGFGNNPASVTAASSSHEPPSHKSVVGVLPSFPNSYSSAQTITSTLAS
LNACPPPIPPLPSMPSMPPMPTLPTMPVPPPVSSLPPMPTISPLSQGPPVPPMSHLSHMS
SMPPFNPSLPPPGGMGSGLPLGAPNPMLFNPLSPLASLGLQAHMKAAAAAAAGTGVAHPD
ELFIQLHNLPFTCSEMEVREFFRGLGVDGVRLLRDGQGRPTGRAMVKFFSPQDSFEAVKR
GGGMMGQRFIEITPGSERQWASLNDSMMGHVPHNSSKSMNSNESQDQHQRRGNAGAGGRD
QRARSRSPHRLEFCVYLKGLPYEADKKQIKEFFNNLSVLEDSVYIAYGPNGRATGEGFLE
FKTEQDYKIALGSHMQYMGTRFIQVHPINRKGMLEKIDSIRKREASQGDGKNQDGSKVPR
NCAHITNIPYNVSKKDVRAFLEGVGLYEDTLKVLTDSHGNGLGQAIFQLRTEEDARKSER
LHRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQTQPNQNLNQNQHQQSQPSPQQ
PQINPFTGISGEEFNFLRNTMGNLNNAPFVSPFSAPGNGLAGPPPLPPLAAGLGDINMGM
APPLIAGLPGAPIMEPPGFRPGVAGGASFNQDGLRGLVSFDNVNRKAGGGGQNRGVGANN
NQGRPGGGATGGPQAFSPGAEGHRNQPAPGGSSNPNGQRGAPGPTIVKLQNMPFTVTVDE
IMDFFYGYQVLQGSVCLQFSEKGLPTGEAMVAFQNHEEASAAVMDLNDRPIGARKVKISL
G
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagtcatcagactacagggtctgcctatagtggctggcaccatggacatcaga
cacttcttctctggcctaaccatccctgacgggggagttcacattgttgggggtgagcat
ggcgaagccttcattgtctttgcaactgatgaggatgctcggctgggcatgatgcgtaca
ggtggggctattaagggcttaaaagtgtccctgttgcttagcagcaagacagagatgcag
aacatgattgaactcagccgccgcagatttgaggctggggcaggtgctggggagacagct
gcaccaactgcaggacatgctcaccgacaagcaggcacaatccccatacccacagtgcaa
caagggaccggggggagaagcagtagccatggaaaccaaggtttcggtaacaacccagct
tcagtgacagcagcaagctcatctcatgagccgccgagccacaagtcggttgttggtgtt
cttcccagcttccctaatagctacagctctgcccaaaccatcacctcaactctggcatca
ctcaatgcatgcccaccacccatccctccacttcccagcatgccttccatgccccccatg
ccaacgctgcccacaatgccagttcctcctccagtgtcttcccttccccctatgcccact
atctcccccctgtcccaaggacctccagtgcctcctatgtcccatctctcccacatgtcc
tccatgcctcccttcaacccctccctccctcccccaggaggaatgggctccggcctccct
cttggtgccccaaaccccatgctgttcaaccctctctcccctctagcctctctgggcctc
caggcacacatgaaggcagctgctgcagcagcagctggaaccggagtggcccacccagat
gagttgtttatccaactgcacaatctcccattcacttgctcagagatggaggttagggaa
tttttccggggtctgggggtggatggggttcgactgctgagggatgggcagggtcggcca
actggcagggctatggtcaagttcttctcaccccaggacagctttgaagctgtcaaacga
ggaggtggcatgatgggccaacggtttattgagataaccccaggctctgagcggcaatgg
gccagtctcaatgacagcatgatgggccatgttccccacaatagcagcaaatcaatgaac
agcaacgagtcacaggaccagcatcaacggcgtggtaatgctggtgctggaggtagagat
cagcgagcaaggtcacgatctccacatcggctggagttttgtgtctacctgaaaggcctt
ccctatgaagccgacaagaaacagattaaggaattcttcaataatctatccgtcctggag
gacagtgtctacattgcctacgggcctaatggacgagccacaggagaaggcttccttgag
ttcaaaaccgaacaagactacaaaattgctctgggctctcatatgcagtacatgggcact
cgctttatccaggtccacccaatcaaccgtaagggaatgcttgaaaagatagacagcatt
cgcaaacgtgaagcatcacagggtgatggcaagaaccaggacggttcaaaagttcccagg
aactgtgcccacatcaccaacatcccttacaatgtctccaagaaggatgtccgtgccttc
ctggagggtgtagggctgtacgaggacaccctaaaggtattgacagatagccatggtaat
ggtttaggtcaagcaatcttccagctgcgcacagaggaagacgcccgaaaaagtgaaaga
ctgcaccgacaaaaactcaacggtcgtgatgcatttgtccacctggtaacctttgagcag
atgaaggaaattgagaggaacccccctccccagaataagaggggacaacgcaaccagacc
cagccgaaccaaaatctaaatcagaaccagcaccagcagtcccagccttctccccagcaa
ccccagataaacccatttacgggaattagtggggaggagtttaactttctcagaaacaca
atggggaacctaaacaatgccccctttgtgagtccattctcagccccagggaacgggctg
gcaggccctcctcctctaccaccccttgcagcagggttgggagatataaatatggggatg
gctcctccactaattgctggtcttcctggagctccgatcatggagccaccaggctttcga
cccggagttgcaggaggcgcttctttcaaccaagatgggctaagagggttagtgtccttt
gacaatgtcaacagaaaagcaggtggaggtggtcagaatagaggggtaggggctaacaac
aatcaaggacgtccagggggtggggctactggtgggccacaggcgttcagtccaggagct
gaaggtcaccgtaaccagccggcccctggaggatctagcaatcccaacggtcaacgaggt
gcccctggcccgacaattgtaaagcttcagaatatgccattcactgttaccgtagacgag
atcatggacttcttttatggctaccaggtgctacaaggctcagtctgcctgcagttcagt
gagaaaggtctgccaactggcgaggccatggttgcctttcaaaaccatgaggaggcctct
gccgctgtcatggacctcaatgaccgacctattggagcacgcaaagtcaagataagcctt
ggttaa
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