Pseudochaenichthys georgianus (South Georgia icefish): 117446246
Help
Entry
117446246 CDS
T09629
Symbol
atg4da
Name
(RefSeq) cysteine protease atg4da
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04136
Autophagy - other
pgeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117446246 (atg4da)
04136 Autophagy - other
117446246 (atg4da)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117446246 (atg4da)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117446246 (atg4da)
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117446246 (atg4da)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
117446246 (atg4da)
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117446246 (atg4da)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117446246 (atg4da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
117446246
NCBI-ProteinID:
XP_033938217
LinkDB
All DBs
Position
1:29147183..29156051
Genome browser
AA seq
499 aa
AA seq
DB search
MNSVSPSAVQYVGVVMQEELVETRRPQPLERQGSFGLRPAPTTEPGREANGEPDELDKLK
SKLMTAWNNVKYGWTVKSKTSFNKTSPVIVLGNSYLLNSEDEVERFRLAFVSRIWLTYRR
EFPQLDGSTLTTDCGWGCMLRSGQMLLVQGLLVHLMPRDWAWPDAQQLTEVDFEVFRPRS
PARAGGVPIPSFGSPRGSNTPEKSLASDQVSKCSQKKGPEYRRDSQAETLHHKLVSWFGD
QPPAPFGLHQLVDIGKSSGKKAGDWYGPSIVAHILRKAVAKTSVLHNLAIYVAQDCTVYK
EDVVHLCDLSLSQIPPDPSSQAWKSVLILVPVRLGGEVLNPSYIECVKNILKLECCIGII
GGKPKHSLYFVGFQDEQLLYLDPHYCQPLVDVSQVNFSLESFHCSSPKKMPFNRMDPSCT
IGFYAKNKKDFASLCSAVSEALSSSKEKYPIFTFVEGKSQDFGLEGHGSNNSGPAAHILP
PGRQGMMNNRRNSDEFVFL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaactcggtttcccccagcgcagtacagtatgtgggggtggtgatgcaggaggagctg
gtggagacccggaggccgcagcccctcgagcggcagggcagcttcggtctcaggccggcc
ccgaccacagagcccggcagagaggccaacggagagccggacgagctggacaaactgaaa
tccaaactgatgacagcgtggaacaacgtcaaatatggctggactgtcaaatctaaaact
tcattcaacaaaacctccccagtcatcgtcctgggaaactcctatctgctcaacagtgaa
gatgaggtggagcggtttcgtctggcctttgtctccaggatctggctgacctacaggagg
gagttccctcagctggacggctccaccctgaccacagactgtggctggggctgcatgctg
cgcagcggccagatgctgctggtgcaggggctgctggtccatctgatgcccagagactgg
gcttggccagacgctcagcagctcactgaagtggactttgaggtgttcagaccgcgctcc
ccagcccgggcaggaggggtccccatcccctcctttggctctccacgcggatccaacacg
cctgaaaagtccctggcgagtgatcaggtatccaagtgcagccagaagaagggacctgag
tatagaagggacagtcaggcagagaccctccaccacaagctggtctcctggttcggggat
cagccgcctgcacctttcgggcttcaccagctggtggacatcggtaaaagttcagggaag
aaggctggagactggtacggaccctctatcgtggctcacatactacggaaagcagtagcc
aaaacctctgtgctccacaacctggctatatacgtggctcaggattgtactgtgtacaaa
gaggatgtggtgcatttgtgtgacctgtcgctgagccagatcccgcctgacccgtccagc
caggcctggaagtctgtcctcattctggtgcctgtacggctcgggggggaagtcctcaac
ccgtcctacatcgaatgtgtcaagaacatcctgaagctggagtgttgtattggaatcatc
ggaggcaaaccgaagcattcactatacttcgttggcttccaagacgagcagctgctgtat
ctggaccctcactactgccagcctttggtggatgtgtcacaagtcaacttctcactggag
tcgttccactgtagctctcctaagaagatgcccttcaaccgcatggatcccagctgtacc
atcggcttttatgccaagaacaagaaggactttgcgtctctatgttctgctgtcagtgag
gccctgtcatcatcgaaggagaagtaccccatctttaccttcgtagagggcaagagtcag
gattttggacttgagggccacggcagcaataacagtggacctgcagcccacatcctgccc
cccggcagacagggcatgatgaacaacagaagaaacagtgatgagttcgtcttcctgtag
DBGET
integrated database retrieval system
