Pseudochaenichthys georgianus (South Georgia icefish): 117446266
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Entry
117446266 CDS
T09629
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X3
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00450
Selenocompound metabolism
pgeo00970
Aminoacyl-tRNA biosynthesis
pgeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117446266 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117446266 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgeo01007
]
117446266 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117446266 (mars1)
Enzymes [BR:
pgeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
117446266 (mars1)
Amino acid related enzymes [BR:
pgeo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117446266 (mars1)
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117446266 (mars1)
Prokaryotic type
Other AARSs
117446266 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
WHEP-TRS
Anticodon_3
tRNA-synt_1
GST_C_3
GST_C_2
GST_C
GST_N_2
GST_N_3
GST_C_5
tRNA-synt_1e
DUF16
GST_N
Motif
Other DBs
NCBI-GeneID:
117446266
NCBI-ProteinID:
XP_033938243
LinkDB
All DBs
Position
5:complement(24318927..24336170)
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AA seq
927 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAAVEVSGVQCDVQYVNHEERVVPFLSRPALPALLLPSGLHLFSS
NAICRYLFEVSGKDSSELCNQWLEWEATDLQPALLQALHLAVVQGKGSEVSKVLQGPLNY
LEQSLSKGNTPYLTGESVSVADVVLWAALYPVLSDASLALGERASIKAWFDRGAVMHSCQ
SAAQKVLQGKGLQGMQSYMQRQPAPPSSQCRDSQPCNSNPAESEESERAVSAEEMETAAL
TWSKGLNTCSMATSRQHPILPQEGKRNILLTSALPYVNNVPHLGNIIGCVLSTDVFSRYG
RMRGWNMLFISGTDEYGTATENKAREEGLTPQQICDKYHVIHSNIYKWFQIDFDFFGRTT
TEKQTEIAQNIFWRIHKHGFLVEDTVEQLRCEKCQRFLADRFVEGICPHCSYPEARGDQC
DKCGKLINAVELREPQCKVCKETPSIRSSKHLFLDLPKLEGQLEQWLDKSTSTGDWTANA
KQITRSWLRDGLKPRCITRDLRWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTDQWEK
WWKNPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLIATEYLNYEDTKFSKSR
GVGVFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRAG
MFVTKFFEGCVPAMELQQEDKRLLALVGWELQQYIQLLDKVKIRDSLRHILNISRHGNQY
IQLNEPWKKIKGGDTERQRAGTVTGVSVNIACLLSVMLLPYMPTVSQTIRDQFNAPQSCV
DTMLQGTGTFVCSLSAGHRIGTVSPLFQKLEVDQIEALKKEFGGQQSDDEPPKKKKTAQS
AGSPPPAAGPAAAAAEVVAGIGADPEKAKQLTQAVAEQGEKVRELKAQKAEKAAITAEVA
KLLDLKKQLALAEGKSSDPPPQKGKKK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaaactattcgtcagtgaaggcaacccgcactgcctgaaagtgttagcagctgtagaa
gtgagtggagttcagtgtgatgtccagtatgtcaaccacgaagagagagtggtgcccttc
cttagccgtccagccctgcctgcccttctcctgcccagtggactgcatcttttcagctcc
aatgccatctgccgatacctgtttgaagtaagtggaaaagactccagtgaactttgcaac
cagtggcttgaatgggaggccaccgatcttcagcccgctctgctacaggcccttcacttg
gcagtggtgcagggaaaaggttcagaggtgtccaaggtcctccaggggccactaaactac
ttggagcaaagcctgagcaaggggaacacaccatatttaactggggaatctgtttcagtt
gctgatgttgttttgtgggctgcgctgtacccggttttatctgacgcttcactagcattg
ggcgagcgtgcgtctattaaggcctggtttgaccgtggggctgttatgcacagttgccag
tctgctgctcagaaagtgctgcaggggaaaggcctgcagggcatgcagagctacatgcag
aggcagcctgcccccccgagcagccagtgcagagactcacagccatgcaacagcaaccca
gcagagagtgaggaaagtgagcgcgcggtgtcagcagaggagatggagacagctgctctc
acctggagtaaaggtttgaacacctgctcaatggctacaagcagacagcaccccattttg
ccacaggaaggcaagcggaacatcctgctcaccagtgccttgccttacgtcaacaacgtc
ccccacctgggaaacatcatcggctgcgtcctcagcactgatgtgttcagcagatatggc
cgcatgcgaggctggaacatgctgtttatcagtggcacagacgagtatggcacagctaca
gagaacaaggccagagaggagggtctgaccccgcagcagatctgcgacaagtaccatgtc
attcactcaaacatctacaagtggttccagattgacttcgacttttttggcagaaccacc
accgaaaagcagacggaaatcgcccagaatattttctggagaatccacaagcatggtttt
ctagtggaagacacggtggagcaactacggtgtgaaaagtgccagcgcttcctcgccgac
cgcttcgtggaaggcatctgtccccactgcagctacccagaagcccgtggtgaccagtgt
gacaagtgtgggaagctcatcaacgctgtggagctcagggaaccccagtgtaaggtctgc
aaagagactccatccatccgctcctccaaacatcttttcctggacctgccaaagctcgag
ggtcagttggagcagtggctggataagtcaaccagcacaggtgactggacggcaaatgcc
aaacagatcactcgctcctggctgagagatggactcaaacctcgctgcatcactagggac
ctgcggtggggaacgccggtacctcatcctgacttcaaagagaaggtgttctacgtgtgg
tttgatgcccccattggttatctgtccattactgctaactacaccgaccaatgggagaag
tggtggaagaatcctcatcaggtggagctgtacaatttcatggccaaagacaatgtgccg
ttccacagtgtggtgtttccctgctccctactgggagctcaggacaactacactctggtc
aaccacctcatcgccactgagtatctgaattacgaggacaccaagttctccaagagccgt
ggtgtgggtgtgtttggagacatggccaaggacaccggcatcccatctgatgtgtggcgc
ttctacctcctgtacgtgcgtccagagggacaggactcggctttctcctgggccgacatg
gctctgaagaacaactctgagctgctcaacaacttgggcaacttcattaacagagctggc
atgtttgtcaccaagttctttgagggctgtgtgcctgcgatggagctccagcaggaagat
aagaggctcctggctctggtgggctgggagctgcagcagtacatccagctcctggacaaa
gtcaaaatccgtgactctctgagacacatcttgaacatctctcgccatggcaaccagtac
attcagctcaatgaaccctggaagaagatcaagggaggagacaccgaaaggcagcgtgcg
ggcacagtcaccggtgtgtctgtgaacatcgcctgcttgctgtcagtgatgctgctgcca
tacatgccgacggtcagccagaccatcagggatcagttcaatgcccctcagtcttgtgtc
gataccatgttgcaaggcactggcacctttgtatgttccctgagtgccggccaccgcatt
ggcactgtcagtcctttgttccagaaactggaggtggaccagattgaggctttgaagaag
gaatttggtggacagcagtctgacgatgaaccgcctaaaaaaaagaagaccgctcagagc
gctggcagccccccgcccgccgctgggccagctgctgctgctgctgaggtggtagcgggg
atcggagcggacccagagaaagccaagcagctcactcaggctgtagctgagcagggcgag
aaggtgcgagaactcaaagcccagaaagcggagaaggcggcgatcacagcagaggtggcc
aaactgttggacctaaagaaacagctggctctggctgaggggaagagctctgacccgcca
cctcagaagggcaagaagaagtga
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