Pseudochaenichthys georgianus (South Georgia icefish): 117446284
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Entry
117446284 CDS
T09629
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
pgeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117446284 (ddx19b)
03015 mRNA surveillance pathway
117446284 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117446284 (ddx19b)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117446284 (ddx19b)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117446284 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117446284
NCBI-ProteinID:
XP_033938275
LinkDB
All DBs
Position
5:complement(13240313..13256888)
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AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAADSIGGLTLKEKPEANGTAAIATDSSSVAAKSEVQGEKKPADED
DKDDKAAQSLLNKLIRSNLVSNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLNGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVEPNNKYPQCLCVSPT
YELALQTGKVIEQMGKQYEEVKLVYAIRGNKLPRGTKLHEQIVIGTPGTMLDWCSKFKFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPENCQMLLFSATFEETVWNFAQRIVPG
PNIIKLKREEETLDTIKQYYVLCNSREEKFQALCNIYGAITIAQAMVFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFRNGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDRDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKASMNILTRIQEHFSKNIEKLDTDDL
DEIEKIAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcttgggcacaggcggtggacgagcaagaagccgcggcggactcgatc
ggtggcctcacattaaaagagaaaccagaggcaaatggcacggcagcaatagcaacagac
tccagcagtgtagctgcaaagtcggaagttcagggagaaaagaagcctgcagatgaagac
gacaaagacgacaaggcggcgcagtctttattgaacaagttaattagaagtaatcttgtc
agcaacacaaatcaagtggaagttcttcagaaggatcccaactctccgctctactctgtc
aagtcttttgaggagttgcgactcaaaccacagctgcttaacggtgtgtatggcatgggt
ttcaaccggccatccaaaatccaggagacggccttaccgatgatgctggccgaacctcca
cagaatctgattgcccagtcacagtcgggaacagggaaaacagctgcttttgtcctggcc
atgctcagtcatgtcgaacccaacaacaaatatccccagtgcctgtgtgtgtcacctacc
tatgaactggcacttcagactggcaaggtaatcgagcagatgggaaaacaatatgaggag
gtcaaactcgtctacgccatcagaggaaacaaattgccacggggcacaaagctgcatgaa
cagatcgtcattggcacgcctggtaccatgctggactggtgcagtaaattcaagttcata
gaccccaagaagatcaaggtgtttgtgcttgacgaggccgacgtcatgatcgccacacag
ggtcaccaggaccagagcatccgcatccagaggatgctgcctgaaaactgccagatgtta
ctgttctccgccacgtttgaagagactgtgtggaacttcgcccagcgcattgtgcctgga
cccaacatcatcaagttgaagagagaggaggagacgctggataccatcaaacagtactat
gtgctgtgcaacagcagagaggagaagttccaagccctgtgtaatatctacggagccatc
accatcgcccaggccatggtcttctgccatacaaggaagactgcgggctggctggcaggc
gagctgtccagagaaggccaccaggtggcgctgctcagcggagagatgcaggtggagcag
agggccgctgtcatcgatcgcttcagaaacggaaaggagaaagttctggtcaccacaaac
gtctgtgcccgaggtatcgacgtcgagcaggtttctgtggtgatcaacttcgaccttcct
gtcgacagggatggtaacccggacaacgagacatacctgcacaggattggtcgcacaggt
cgatttggcaaaagaggactggccatcaacatggtggacagcaaggcgagcatgaatatc
ctcaccaggatccaggagcatttcagtaagaacatcgagaaactagacacggatgatctg
gatgaaattgagaaaatcgccagctaa
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