KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117446287
Entry
117446287         CDS       T09629                                 
Symbol
zc3h11a
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 11A
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgeo03019]
    117446287 (zc3h11a)
Messenger RNA biogenesis [BR:pgeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117446287 (zc3h11a)
SSDB
Motif
Pfam: zf-CCCH_3 zf-CCCH_2 zf_CCCH_4
Other DBs
NCBI-GeneID: 117446287
NCBI-ProteinID: XP_033938280
LinkDB
Position
5:42630945..42645249
AA seq 878 aa
MTNHGDDCYFFYYSTCTKGDSCPFRHCEAAMGSEIVCNLWQEGRCFRTVCKFRHMEITKN
RKEIPCYWESQSAGCQKPHCAFFHDRPRYIEGMFVPPDKSLNKAEEQPHEEPAPPPLAPL
PTAANPQLRGVIKTETQEPVPSPTHPPVVINPADDDEDEDDQYSEEGEDGRVGLSPRKLS
KSDSLNFGVSTLEEIRLRKALKASMKRTGYPIQRADTSSNGEKENIQSFFRPALFETGEG
PLLFQESGRARGSVAERLGKKMPNSDMNNGDGVPLRRGLAGRLGRIVDEEEPPQKALKPI
KDRLGLPGSVSPTKPAETNVEPRKASEQIRIKTLEEIRQEKAGKSPSQSRKAHPETDIPK
PTKSAKRAITVKKDPISHIKTFSEILHAKKKRQEDQDQSPTLKKARLSGEKAAGRSQGPS
DTVAASPEAANLGELGVKTLEEIRMEKAGRSPAPQCLEAENKKSSDSEETDAKKPRLASR
GIKKPARQTGNGTAEQSDQVTQKTAAPEASDATSNNLKVKTFEEIMREKRLRKQEMEEQA
KGLAEAEPSQKQTAEGASKRTVPAKVTVTYQGSSPPDSTPSTQKLPVSKPIPLNSKAASP
LSSSPPRIRPAAVTTASSSPAKKSSSPLQAETKCDSQSPGSSREVPDKNTRSPTSLPLAR
QARAAPQGATSDITLNNYQKSPEHTANTKVRPKLNVKPSVMKPAVQLKPGQKRRGAQRSA
VAAVKPLNSGPAVQEGPRQETACRDRQESPQSNAEAQLSAAVPRSPSTLLDLGSGCSPLT
EELQTVPVFTQSQETPQAVRDACTVPQSPVLKSPTQPKSRRLSAARTTSTSSTAVSTSAV
DDFEELINEFTDDHLEGDMDPGIEEDDLLQELSEMIDS
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgaccaaccatggagatgactgctacttcttttactattccacctgcactaaaggagac
agctgccccttcagacactgtgaggcagctatgggcagtgagatcgtctgcaacctctgg
caggagggacgctgtttccgtaccgtctgcaagtttcgccacatggagatcacaaaaaac
cggaaggagataccttgttattgggagagccagtcagccggctgccagaagccacactgc
gccttcttccatgacaggccgcgctacatcgagggcatgtttgtcccaccggacaaaagt
ctaaacaaagccgaagaacagccacatgaggaaccagctcccccgccacttgcccccctc
cccactgcagccaatccccagctcagaggcgtgatcaagacagaaactcaggagccagta
ccaagccccacacacccacccgtggtcattaatccagcagatgatgacgaggatgaagat
gaccagtactcagaggagggagaagatggaagggttggcctctctcctagaaaactatcc
aagtcagactcactgaactttggagtgagcaccttggaggagattcggctcaggaaggcc
ctgaaggccagcatgaagagaactggttaccccatccagcgcgctgacacttcgtccaac
ggagagaaagaaaacatccagtcgttcttccgaccagccctctttgagactggagaaggc
ccacttctctttcaagaaagtgggagagccagaggtagtgtggctgaaaggcttgggaag
aagatgcccaacagcgatatgaacaatggagatggtgttccactgagaagagggctggct
gggcgtctgggaagaattgtggatgaggaagagccccctcagaaagctttgaagccaatt
aaagacagacttggattgcccgggtctgtttcccccaccaaaccagctgagaccaacgtg
gagccaaggaaagcttctgagcagatccgcatcaaaactctggaggaaatcagacaggag
aaggcgggaaaatctccctcccagagccgcaaagcccatcctgaaaccgacatacccaaa
ccgaccaagagtgctaagcgagctatcaccgtcaaaaaggatcccattagccacatcaaa
accttctctgagatcctgcatgcaaagaagaaaaggcaggaggaccaggatcagagcccc
accctcaagaaggccaggctcagtggagagaaagctgcaggcaggagccaggggccgtct
gacactgtggctgctagtccggaggcagcaaacctgggggagctgggagtgaagactctg
gaggagatccgcatggagaaggccggcaggagtccagctccgcagtgcctggaggctgag
aacaagaagagctctgattctgaagagactgatgctaaaaagcctcgcctggcctcgagg
ggcatcaagaaaccggctcggcaaacaggcaacgggaccgcagagcagagcgaccaagtg
acccagaagacggctgctcctgaggccagtgatgccaccagtaacaatctcaaggtcaag
acctttgaggagatcatgcgggagaagcgccttcgcaagcaggaaatggaggagcaagcc
aaaggcttggctgaagcagagccttctcagaaacaaaccgctgaaggagcctcgaaaagg
acggttcctgctaaggtcactgtcacataccaaggctcttcaccccctgactctacccct
tcgacccaaaagctccctgttagtaaaccgatccctctcaattccaaggctgcttcccct
ctgagcagctcgcctcctcgtataagacctgctgccgttacaactgcatcctcaagccct
gcgaagaagagctcttctccactgcaagctgagaccaagtgtgactcgcagagccccggc
agctccagggaggtcccagacaaaaacaccaggagtcccacttcacttccgctagccagg
caggccagagcggctccgcagggtgctacttctgatataacactgaacaattatcagaaa
tccccagaacacactgcaaacacgaaagtgaggccaaagctgaatgtgaagccgtctgtc
atgaagcctgcagtgcagctgaaaccaggccagaagagaaggggggcgcagcgctctgct
gttgctgctgttaaacccctgaacagcggccccgcagtgcaggaggggccccggcaggag
acagcatgccgagacagacaggagtcccctcagtccaatgcagaggctcagctgagcgct
gctgtcccccgcagtcccagcaccctactagacttggggtcgggctgcagccccctgaca
gaggagctccagactgtcccagtgttcacacagagccaagagaccccacaggctgtcaga
gacgcctgtaccgtcccccaaagccccgtcctgaagtcccccacacagccaaagtcacgg
agactgagtgcagcccgcaccacctccacctccagcactgccgtctccacctccgccgtg
gatgactttgaggagctgataaacgagtttaccgacgaccatctggagggagacatggac
cctggcatcgaagaggacgacctgctgcaggaactctcagagatgattgacagttga

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