Pseudochaenichthys georgianus (South Georgia icefish): 117446329
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Entry
117446329 CDS
T09629
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117446329 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117446329 (nelfcd)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
117446329 (nelfcd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
117446329
NCBI-ProteinID:
XP_033938380
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All DBs
Position
5:23473201..23487032
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AA seq
579 aa
AA seq
DB search
MDEEYYSGGGRDWEGTGEAPMEYVEGENDGKIQEDCLQKFSSRDYIMEPAVFNTLKTYFQ
SGGSPEHVIALLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLMDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILSQE
EQGGSAIRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSSSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRIEGEHDPVAEFISHCKSNFIMIN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatactacagcggtggtggccgagactgggagggcacgggggaggctccc
atggaatatgtggaaggggaaaatgatgggaaaatccaggaagattgcctgcagaaattc
tccagtagggattacatcatggagcctgccgtcttcaacacgctcaaaacatatttccag
tccggaggctctccagaacacgtcatcgcgcttctctctgaaaactactctgctgtggct
cagaccgtcaacctgctggcagagtggctcatccagatgggtgtagagccagctcaggtc
caagagcgagtagaaaatcacctcaagagtctcctgataaaacactttgacccccagaaa
gctgattctattttcactgtcgagggagagacccctgcttggctggagcagatgatagct
cacaccacgtggagagatctgttctataagctggcagaggctcacccagactgcctgatg
cttaacttcactgtcaagctcatctcagacgcaggctatcagggtgagatcaccagtgtg
tccacagcctgccagcagctggaggttttctcccgggtgttgaggacgtctttggccacg
ctgatggacggaggagaagaaaacctggagaagaacctgccagaatttgctaagatggtt
tgtcacggcgagcacacctacctgttcgcccaggccatgatgtccatcctctctcaggag
gagcagggcgggtcagctattcgtaggatcggacaggaggtgcagaagtcggcacatgag
cgaggtcacgatgccagtcagataaccctcgcgctcggcacagcggcagcctaccctcgg
gcctgccaggcgctgggggccatgctgtctaaaggagccctgaaccctgcagatatcacc
gttctgttcaagatgttcagcagcatggacccgcctcctgtggagctgatcagagtgcct
gcctttctggacctgttcatgcagtcactgtttaaacctggatcaaagatcaaccaagac
cacaaacacaaatacatccacatcctggcctacgctgccagtgtggtggaaacgtggaaa
aagaacaagcgagtgaacatcaataaagatgagctgaagtcgtcttctaaagccatcgag
accgtgcacaacctgtgctgcaacgagaacaaaggagccacggagctggtggctgagctg
ggaacgctgtaccagtgcatccggtttccagtggttgctatgggggttttgaaatgggtg
gactggacggtgtccgagccgcgctacttccagctgcagacagaccacactccagtgcat
ttagctttactggacgagatctgcacgtgtcaccagctgctgcacccgcaggtcctccag
ctgctcatcaagctctttgagacggagcactctcagctggacgtcatggagcagctggag
ttgaagaagacgctactggaccgaatggttcacctgctgagtcgtggctacgtgctgcct
gttgtgggttatatccgcaaatgtctggagaaactcaacacggacatctccctcattaga
tattttgtcactgaggtgctggatgtgatcgcgcctccctacacgtcagacttcgttcag
ctcttcctgcccatcctggagaacgacagcatcgcggggacaatccgcatcgagggggag
cacgaccccgtggcagagttcatatctcattgcaaatcaaacttcatcatgataaactga
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