Pseudochaenichthys georgianus (South Georgia icefish): 117446528
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Entry
117446528 CDS
T09629
Symbol
cacna2d2a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2a isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04260
Cardiac muscle contraction
pgeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117446528 (cacna2d2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117446528 (cacna2d2a)
04261 Adrenergic signaling in cardiomyocytes
117446528 (cacna2d2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117446528 (cacna2d2a)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117446528 (cacna2d2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
DASH_Spc19
vWA-TerF-like
Cache_3-Cache_2
CRISPR_Cas9_WED
Motif
Other DBs
NCBI-GeneID:
117446528
NCBI-ProteinID:
XP_033938639
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Position
5:16998589..17145311
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AA seq
1109 aa
AA seq
DB search
MAICAQSYGVFCLFAIQTVLIICVSTPTDGTHLFPQHYTMIHWAGRIEKELEKVLQHVTG
TQQMRSIYNEKKSQFEIKRNNPKELVERVARDISKLLISKRKALEKLTREAEQLQKDHEW
QDGVTESAISYYDSKAGSDYQTEDGEEENPPESSTSMELEFVDDPNFKYQVNYSSSAVQI
PTDIYKGSPTILNELNWTQALEKVFIENHRDDSSLRWQVFGSATGVTRYYPATPWRAPKK
IDLYDVRRRPWYIQGASSPKDMVIIVDVSGSVRGLTLKLMKHSVIEMLETLSDDDYVNVA
KFNEKAAAVVPCFRNLVQANNRNKEIFKKAVCDMSAKGTTDYKSGFTFAFEQLLNESSAP
RANCNKMIMMFTDGGEDRAQEIFEKYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGY
YFEIPSIGAIRINTQEYLDVLGRPMVLAGNKAQQVQWTNVYQDVLGLGLVITGTMPVFNR
TVDTVSPQNQLILGVMGVDIAINEIKRKTPTYRLGANGYTFAIDPNGFVLLHPNLRPKIF
DYKEPITLDFLDAELEDSNKEEIRRQMIDGKSGQRKIKTLIKSVDERYIDEAVRTYTWTP
VNGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEGHVFIAPREYCNDLE
LSNNNTEFLLNFIALMEKVTPDSKHCDNLLLHNLILDTGIIRQLVEKVWKNKDLNTYGFL
AVFAASDGGVTRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTARDELLNPE
NDTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWTDKFKILASNHTDNNQGSNTCGPNR
GCEMDCEANSEDLLCYLIDDGGFLIMSNQKEEWNKVGMFFSDVDPYLMYALYNNSFYNRK
QSYDYQSVCEKVPKSQNGAAPRGVFVPTIADFVNVAWWTSAAAWSLFQQFIYGLAYQSWF
VRDEVDAEGMDSTRVRSCVMKQTQYFLSNLSSSYNILQDCGNCSRLIHAKRINNTNLLFV
VAEKMPCNSCEIEKLSHEEEEFKDENPCEELTVPRYRKGPGTCFDNNLTENTSDCGRGHS
FRPSLYTLLLIQLLLLYPAVSPHFHSLLH
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgcgcagtcgtacggtgttttctgtctcttcgcaatccaaactgtactt
atcatatgcgtctccacgccgacggacgggacccacctcttcccccaacactacacaatg
attcactgggcaggacgcatcgagaaggagctggaaaaggttctgcagcacgtcaccgga
acccagcagatgagatcgatttataatgagaagaagagccagtttgaaatcaagaggaac
aaccccaaggaattggtggagcgagtggcacgggacatctccaagcttctcatcagtaag
aggaaagccctggagaaactgaccagggaggccgagcagcttcagaaggatcacgaatgg
caagatggtgtgacggagagtgccatttcatactacgattccaaagcgggttcagactat
caaacggaggacggggaagaggagaaccccccggagagctcgacgtccatggagctggag
tttgtggatgatcccaatttcaaataccaggtcaactactcttcaagtgcggtccagatt
cctacagacatatacaaaggctctccgaccatcctcaacgagttgaactggacccaggcg
ctggagaaggtcttcattgagaaccatcgggacgacagctctctgcgctggcaggtgttc
ggcagcgccacaggagtgactcgatattacccagccactccatggagggcgcccaaaaag
attgacctgtacgacgtccgcagaagaccttggtatattcagggtgcatcttctccaaag
gacatggtcatcattgtggatgtgagtggcagtgttcgcggactcactctgaagctgatg
aaacactccgtaattgagatgctggaaactctatcagacgacgactatgtgaatgtggct
aagttcaatgagaaggctgcagcagtcgttccatgcttcaggaatttggtccaagccaat
aatcggaacaaagaaatcttcaagaaggctgtctgtgatatgagtgccaaaggaaccaca
gattacaagtctggcttcacatttgcctttgaacagcttctcaatgagagcagtgccccg
agggccaactgcaataagatgataatgatgtttacagatggcggtgaggatcgtgctcag
gagatctttgagaagtacaactggcccaacaaaacagtacgtgtgttcaccttctctgtt
ggccagcataattacgatgtaacccctttgcagtggatagcttgtgccaataaaggttac
tactttgaaattccatccattggagccatcagaatcaacacccaggagtacctggacgtc
ctgggccgtcccatggtgctggctgggaataaagcgcagcaggtgcaatggaccaacgtc
taccaggatgttctgggtttgggcctagtcatcactgggacgatgcctgtcttcaaccgc
actgttgatactgtgagccctcagaaccagctcatcctcggagtcatgggagtggatatt
gcaatcaatgaaatcaaaaggaagacgcccacatacagacttggagctaacggctacacg
tttgccatcgatcccaatggcttcgttctgctgcatcccaacctgcgacctaaaatcttt
gactacaaggagcccattactctggactttctagatgcagagctggaggacagcaacaag
gaggagatccgtcggcagatgattgatggcaaatccgggcaaaggaaaatcaagacgctc
attaagtcagttgatgagaggtacattgatgaggccgtgcggacgtacacgtggacgcct
gtgaatggtacagattacagtctagggttggtactgcctacatatagtgaaaaccacatc
aaagccaacctgagtgaccagatccttcaggtgcagtattttgaatcactgctgccaaac
agttttgagtctgaaggacatgtattcattgctcccagggagtactgcaatgatctggaa
ctgtccaacaacaacactgagttcctgctcaacttcattgctctcatggagaaggtgaca
ccggactctaaacattgtgacaatttgctcctccataacctgattctggacactggcatc
atcaggcagctggttgagaaagtgtggaagaataaagacttgaatacatatggcttcctg
gctgtgtttgctgcatcagatggaggagttacaagagtgttccccaacaaggctgcagaa
acctgggaggaagaccctgagccgtttaatgccagctattaccggcgcagtctggacaac
aagggctacatcttcagagcgccttatcgaacagcgcgggacgagctgttgaacccggag
aacgacaccatcgggatcctggtgagcacggccgtggagatcacagtaggagggaagacc
atcaaacctgcagtggtcggagtgaagctggaccttgaagcctggacggacaagtttaag
atccttgctagcaaccatacagacaacaatcagggctcaaatacgtgtggaccaaacaga
ggctgtgaaatggattgcgaggccaacagtgaggatctcctgtgctatttaatagatgac
ggtggattcctaatcatgtctaatcagaaggaggaatggaacaaggtgggcatgttcttc
agtgatgttgatccctacttgatgtacgccctctacaacaattccttctacaaccgcaag
cagtcatatgactaccagtctgtgtgtgaaaaagttcccaagtctcaaaatggggctgca
cccagaggagtgtttgtgcccacaattgcagattttgtaaacgtggcttggtggacatca
gcagcggcatggtccttgttccaacagtttatttatggactggcttatcagagctggttt
gtcagagatgaggtggatgcagaaggaatggactctacccgggtgcggagttgtgtaatg
aaacagacgcagtacttcctgagtaatctcagcagctcctacaacatactgcaggactgt
ggcaactgctccaggctgattcatgccaagaggataaacaacaccaacttgctgtttgtg
gtcgcagagaagatgccttgcaactcctgcgagatcgagaagctgtcccacgaggaggag
gagttcaaggatgaaaatccatgtgaagaattgactgtgccgcgctatcgaaaaggaccc
ggcacctgctttgacaataacctcactgagaacacgtcagactgtgggcggggtcactcc
ttccgcccctccctctacaccttactgctcatccagctgctcctgctctatccggctgtc
agcccccactttcactctctactacattaa
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