Pseudochaenichthys georgianus (South Georgia icefish): 117446530
Help
Entry
117446530 CDS
T09629
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117446530 (magi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
DUF2464
Motif
Other DBs
NCBI-GeneID:
117446530
NCBI-ProteinID:
XP_033938645
LinkDB
All DBs
Position
5:9488177..9639076
Genome browser
AA seq
1710 aa
AA seq
DB search
MSKPVLKKNHWTSRVNECSVSKDARGDLNVPLRGGAENGEFAYIGQVNEDVVFYKMGKLS
EGELLLEVENLSISGLPLYDIQTVIKNCKGAVRLKTVRQGSKLNKDLKHYLSQRFQKSSA
DHELQQTIRDNLYRHAVPCTTRGPRDREVPGVDYNFLSVEDFLELEKSGTLLEIGTYDGN
YYGTPKPPVQPPGGKVIRSSGSGGDAPLPDGLSGSLPGSEHSTPRRSKSYNDMQNAGIGP
GEQQQQQEEDEDLPDMNSSFTGDSSELDEIPHSVRPYVPRSDPPYVGRTPSPSATTESTQ
QSNSNLSHPPPEDPLGTLPDNWEMAYTENGEVYYIDHNTKTTSWIDPRCMDKPQKPLEEC
EDDEGVHTEELDNDLELPPGWEKIDDPVYGVYYVDHINRKTQYENPMLEAKRRRQLEQQP
QQPQPQSQQPPEGERYIREWIEDSALAGAPLANYASNHQETYRDPQTGPPMPNAVGQKRG
KPFFTRNRSELNGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMET
GDVIVSVNDICVLGYTHAQVVKIFQSIPIGSMVNLELCRGYPLPFDPDDPNTSLVTSVAI
LDNKDPIIVNGQEALNSYDSPSSHGSQNNNGSTNGGAPHNGLPRPYSPSVDVASDTSSHQ
GYPNDVVTLASSIATQPELITVHMEKGDKGFGFTIADSPGGGGQRVKQIVDYPRCRGLKE
GDIIVEVNKRNVQTMSHNQVVDMLSKCPKGSEVSMLVQRDSQTSRALSGRFQTRVAPAKK
SPKLQLSRKDSQNSSQHSVSSHRSAHTDSPVHPSLAATLNESIAPPPPSQPLPGLPPQDS
PADGTIQRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGFGFRILGGNEPGEPIYI
GHIVKYGAADEDGRLRSGDELVSVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKATY
TVKAEGDVPPSPASSHHSSNQAPSLTEEMGKRDPQGSQNSLNTVSSGSGSTSGIGSGGGG
GGGAGGSVNAVIAVAAATTNSSQPPIVMANAPSTMQPYDVEIRRGESEGFGFVIVSSVSR
PEAGTTFAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNSCSITNKSHSDIVNLI
KEAGNTVTLRIIPGDESSNASLLTNAEKIATITTTHTPQQQAAPEARNNTKPKQESFEFK
APQGPPPQPPTQVSAQDSEFYSVDLDRDNKGFGFSLRGGREYNMDLYVLRLAEEGAAVRN
GKMRVGDEILEINGESTKGMKHARAIELIKSGGRRVHLVLKRGDGSVPEYVNGPDDVITA
YPSSGLQNAAEVSALTNAPSESSYPPEPPQPSRSKKEPTRPSNHRHRSPNKKTSTVKTKG
KKSKGNKLLKKKDDKGSDGHRHHSNGKHRSRHRSPDKVHSRSRSAENTLDTRRGGQRSGR
SPDRRTGQPSNHRSPHRSPYRSPHRSPHRSPRRHRSPHRSRHHSPTRRQYHSSDPYRRNA
SPERQRRVNEKPNGVEAALKEPARTSELSLPFEDSFLRESPAMDRLNREATLPPLRREGR
LYGEDSLLRKASSMERIYKGDSLLRDLAASRSQRDATLPRVRTPDSDSAYKKYSSLLRGR
SPERTVRDDGRFASRDSTPEPQYRARSLGRDISPVRSFRRDDSEDEEDDDNFVAAKVREY
YSTLKTDSSRSSALPEPKKTYKDNPKDLSI
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcctgtgctaaagaaaaaccactggacctccagagtgaacgagtgctccgtc
tccaaagatgcccgcggtgacttgaatgtgccactgcgcggcggcgcggagaacggggag
tttgcctacattgggcaagttaacgaggatgtcgtgttttacaaaatgggaaaattaagt
gaaggagaactgctgctggaggtggaaaacctatcgatttcgggattacccttgtacgac
atacagacagtgataaagaactgcaaaggggccgtcaggttgaaaacggtcagacaagga
agtaagctgaacaaggacctgaagcattacctgagccagcgcttccagaaatcctcggct
gaccacgaactgcagcagaccattcgagacaacctctaccgccacgctgtgccttgtaca
acccgcggcccacgtgacagagaagttcctggcgtggactacaacttcctctcagtagag
gatttcctggagttggagaagagtgggacccttttggaaattggaacgtatgatggtaac
tattatgggacgcccaagccaccggtgcagccccccggtgggaaagtgattcgcagtagc
ggtagcggcggtgatgccccactgccagacgggctcagcggtagcctgccgggctctgag
cactccactccccgacgctccaagtcctataatgacatgcaaaatgctggaatagggcct
ggagagcagcagcagcagcaggaggaagacgaggacctcccggacatgaacagcagcttt
acaggagattctagtgaattagacgagattcctcactcagtgcgcccctacgtcccccgg
agtgacccgccctacgttgggagaaccccctcaccatcggccaccacggagagcactcag
cagtccaactctaacctgagccatcctcccccggaggaccctctggggactctgcctgac
aactgggagatggcctacaccgagaacggagaggtctactatatagaccacaatacaaag
accacctcctggatagaccctcggtgcatggacaagcctcagaaacccctggaagaatgt
gaagacgatgaaggggtccacacagaggagctggacaatgacttagaacttccaccggga
tgggagaaaatcgacgatccagtgtatggggtctactatgttgatcatatcaacaggaag
acccagtatgagaatcccatgttggaggctaagaggcgcaggcagctggagcagcagcct
cagcagcctcagccccaaagccagcagccacctgaaggtgagcgctacatccgagaatgg
atcgaggactcggcgttggcaggggccccgctggccaactacgcttccaaccaccaggag
acctacagggacccccaaacaggaccaccaatgcccaacgccgtgggacaaaagcgaggg
aagcctttctttactcggaaccgatccgagctgaatgggactttcatcaacaccaagctg
aaaaagagtcgccgggggttcggcttcaccgtggtcggaggcgacgagccggacgagttc
ctgcagatcaagagcctagttttagatggacctgccgccctggatggcaaaatggagaca
ggcgatgtgatagtgagtgtcaacgacatctgtgtgctcggctacacccacgctcaagtt
gtgaagatcttccagtccatccctatcggctccatggtgaacttggagctgtgccgcggc
tacccgctgccctttgaccccgatgaccccaacactagcctggtcacctcagtggccatt
ctcgacaacaaagaccccatcatcgtcaacggtcaggaggccttaaacagctacgactcg
ccgtccagccacggcagtcagaacaacaacggctcgacaaacggaggggcgccccacaac
ggcctcccccgaccctacagcccctccgtggacgtggcctccgatacctcttcccatcaa
ggctaccccaacgacgtggtcaccctggcctcctccatcgccacgcaaccagagctcatc
actgtacacatggagaaaggagacaagggcttcggcttcaccatcgccgacagtccagga
ggcggggggcagagggtgaagcagatcgtggattacccgcgctgccgtggcctcaaggag
ggcgacatcatcgtggaggtcaacaagagaaacgtgcagaccatgtctcacaaccaggtg
gtggacatgctcagcaagtgtcccaaaggcagcgaggtcagcatgctggtgcagagagac
tcgcagacctccagagccctaagcggacggttccagacaagggtggcacctgcgaagaag
agccccaaactgcaattgtcgaggaaagacagtcagaacagctcccagcacagcgtttcc
agccaccggagcgcccacacagactcgcctgtgcacccgtccctggcggccactctcaac
gagagcatcgcccccccgcccccctctcagcccctgccgggtctgccgccccaggactcc
ccggcagacgggaccatccaaagaaaaccggacccctttaagatctgggcccagtccagg
agcatgtatgaaagtaggcttccagacttccaagagcaggacattttcctgtggaggaag
gacacagggttcggcttcaggatcctcggaggcaacgagcccggggagccgatctacatc
ggacacatagtgaaatacggcgcggcagacgaagacgggcgcctgcggtccggagatgaa
ctggtaagcgtggacggcaccgcagtggtcggcaagtcgcaccaactggtggtgcaactg
atgcagcaggcggcaaagcagggccacgtcaacctcaccgtgcggcgcaaagccacctac
accgttaaagcagaaggagacgtgccaccctcgccggcgtcctcccaccacagcagcaac
caggcccccagcctgacggaggagatggggaagcgcgacccccagggcagccagaactct
ctgaacaccgtgagctccggcagcggctccacctctggcatcggcagcgggggaggcggc
ggcggaggggcgggaggcagcgtgaacgccgtcatcgccgtggctgcagccaccaccaac
tcctctcagccccccatcgtcatggccaacgccccctccaccatgcagccctacgacgtg
gagatccgccgcggagagagcgaaggattcggtttcgtcatcgtgtcttctgtgtcgcgg
cccgaagctggcaccacctttgctggcaatgcatgtgtggccatgccccacaaaataggg
cgcatcatcgaggggagcccggcggaccgctgcgggaagctgaaggtcggcgaccgcatc
ctggccgtgaactcctgctccatcaccaacaagtcccactctgacatcgtcaacctcatc
aaggaggccgggaacaccgtcacactacgcatcatccccggggacgagtcatcaaatgcg
tctttgttgaccaatgcggagaagatcgccactattaccaccactcacacacctcagcaa
caggctgcccctgaggccaggaacaacaccaagccaaaacaggagtcttttgaattcaaa
gcaccacagggtcctcctccgcagccccccacacaagtctcagctcaggattctgagttc
tactccgtggacctggaccgagacaacaaaggctttggcttcagcctgcgggggggcaga
gaatacaacatggacctgtatgtgctgaggctagctgaggaaggagcggccgtccgcaac
ggaaagatgagggtcggcgacgaaatcctggagatcaacggcgagagcaccaagggcatg
aagcacgcgcgagccatcgagctcatcaagagcgggggccggcgcgtccatctggtgctc
aagaggggtgatggctctgtgcccgaatatgtcaacggccccgacgacgtcatcacagcc
tacccatcctcagggttacaaaacgctgcggaagtgagcgccctgaccaacgcgccatca
gagtccagctacccaccagaaccccctcaaccatcccggagcaagaaggagccgacccgc
ccctccaaccaccgccaccgctcccccaacaagaaaaccagcacagtaaagaccaagggg
aaaaagtccaagggcaacaagttgttaaagaagaaagatgacaagggaagcgacggccac
cggcaccattccaacgggaaacaccgtagccgccaccgctcgcctgacaaggtgcacagc
cggtcacgcagtgcagagaacacgctggacacccgtcgtggcggacaacgcagcggccgc
tcccccgacagacgcaccggtcagccctccaatcaccgctcgccccaccgctctccatac
cgctcacctcatcgctctccacaccgctcaccccgccgacacaggtctccccaccgctct
cggcaccactcccccaccagacgccaataccattcctccgacccttaccgccgcaacgcc
tcgcctgagagacagaggcgcgtcaacgagaagcccaacggagtagaggccgcattgaag
gaacctgctaggacttctgaactcagcctgccgttcgaggacagctttctccgtgagtcc
ccagccatggaccgcctgaacagggaggccacgctgccaccgctgcgcagggaggggcgc
ctgtacggggaggacagtctgctgaggaaggcctcctccatggagagaatctacaagggg
gacagcctgctgagggacctggccgcatcgcgcagccagagagacgccaccttgcccaga
gtgcgcacccccgactcagattcggcctacaagaagtacagctcgctgctgaggggccgc
tcacctgagaggacggtgagggacgacgggcgcttcgccagccgcgacagcacccccgag
ccgcagtaccgagcccgcagcctgggacgggacatctccccggtcaggagcttcaggagg
gacgactcggaggacgaagaggacgatgacaatttcgtagcggctaaggtgagagagtac
tacagcacgctgaagaccgacagcagccgctcatccgccctccccgagcccaagaagacc
tacaaggacaaccccaaagacctgagcatctga
DBGET
integrated database retrieval system
