Pseudochaenichthys georgianus (South Georgia icefish): 117446561
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Entry
117446561 CDS
T09629
Symbol
phf2
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase phf2
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117446561 (phf2)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117446561 (phf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
JmjC_2
RH_dom
PHD_ash2p_like
DUF8096
Motif
Other DBs
NCBI-GeneID:
117446561
NCBI-ProteinID:
XP_071059342
LinkDB
All DBs
Position
5:43734671..43855307
Genome browser
AA seq
1082 aa
AA seq
DB search
MATVAVYCICRLPYDVTQFMIECDACKDWFHGSCVEVDEDDAPDIDIYHCPNCEKNHGKS
TVKKKKNWSKHDTGQSTDIKAVQNGSQVFIKELRSRTFPSADDVVVKLSGGQLTMDYLED
GGFNEPLLVLKKEGLGLSVPPPTFYISDVENYVGPDVGVDVVDVTKQTDSKMKLKEFVDF
YYSTNRKKVLNVINLEFSDTRMNTMVESPHIVRQLSWVENYWPDDALLGKPKVTKYCLIC
VKDSYTDFHIECGGASVWYHVLRGEKIFFLIKPTSANLSLYERWRSSSNHSEMFFADQVD
KCYKCTLKQGQTLFIPSGWINAILTPVDCLAFSGHFVHNLSVEMQMRAYEIEKRLKVKTL
TPFPNFETXCWYVGRHLLERFKGLHKANKQPXPYLIHGAKIINGAFRAWTKKQALLEHED
ELPENMKPSQLIKDLAKEIRLSENATKAIKSEPSIKVPVEDPPPTHSDPEEPEEPVSPAH
VPSPSREKARKKAFKPPKPPKPPKPPKMPKAPKPPKVPKVKEGGKKKAKKIQESSSSSSS
PPPPKPSSFAALESHAKDILSKMDQPKKTRLLKTVLSISEKEISKQKNAEKFEFREQNKN
KTEAKWKYKNSKPDSLLKMEEDCKFDRTPLSGNKDRFSFTMSHKKTLGSKMLKPQTNSSV
FGSLQNLKEDKSKPVRDEYEYVSDEGELKIDEFPIRRKKNAVKRDLSFLSDIKEPIQPAK
KPKFQPLVKPSVDSSDEETLHIDTEVKPEVKSRNSKVKKKGGSAAGILDLLQASKQVGGI
DYSTNSQPPASPSTQEAIQGMLSMANLSSSDSLQQPWSSQSKSNSHSTPAGRKAGGGAGG
GNSKRPTKRLPKKPRKSSSIESLDYDDDQDHMDACFKDSDYVYPSLESEEDNPVFKSRSK
KRKSSDDTPYSPTARVGPSVPRQERPARDGARVASIETGLAAAAAKLSHQEEQQKNKKKK
KSTKKKAIVIEEPPKASQDSSSPEHTVDDGSLTDPEFNTGTVKSPGGPQPMAPGVFLSQR
RPSISSPNNSSNSMSTTSSSMAKVERGVSADAKAKRLKKGMATAKQRLGKILKIHRNGKL
LL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtagcagtatattgcatctgcagattaccttacgacgtgacccagtttatg
atcgagtgcgatgcttgcaaggactggttccacggcagctgtgttgaggtggatgaagat
gacgctccagatattgacatatatcactgtccaaactgtgagaagaaccacggcaaatcc
accgtgaaaaagaaaaagaactggagcaaacatgacacaggacaaagcacagatatcaaa
gctgttcagaacggcagccaggttttcataaaggagctgcgcagcaggacctttccaagt
gctgatgatgttgtggtgaagctgagcggcggtcagctgaccatggattaccttgaggac
gggggcttcaacgagcccctcctggttctgaagaaggagggtctgggcctgagcgtgccc
ccccccaccttctacatcagtgatgtggagaactacgttggtccagatgtgggcgtggac
gtggtggacgtcaccaaacagaccgacagcaagatgaagctcaaagagtttgtagatttt
tactacagcacaaacagaaagaaggtgttgaatgtcatcaacttggagttctcggacaca
cggatgaatactatggttgaaagtccacacattgtacgtcagctgtcctgggtagaaaac
tactggcctgatgatgctctgcttgggaagcccaaagtcactaaatactgtctgatctgt
gtcaaagacagctacacagacttccacatcgagtgtggtggcgcctccgtctggtaccac
gtcctcaggggggagaagatcttctttctcatcaagcccacctctgccaacctgtctctg
tacgagcgctggaggtcgtcgtccaatcacagcgagatgttctttgccgaccaggtggac
aagtgttacaaatgcactctgaagcaagggcagacgctgttcatcccatcaggctggatc
aatgccatcctgaccccggtggactgcctggcgttctcgggacacttcgtccacaacctg
agtgtggagatgcagatgagagcgtatgaaatcgagaagcggctaaaggtcaaaactctc
acccccttccccaacttcgagacgncgtgctggtatgtcggacggcatctcctcgagcga
ttcaagggtttacataaagccaataagcaaccangcccatacctaatacacggtgccaaa
atcattaacggagccttcagagcttggactaagaagcaggcgctactcgaacacgaagat
gagcttccagagaacatgaaaccatcacagctcatcaaagatcttgcaaaagagatccgg
ctctcagagaatgcaacaaaagccattaagagtgagcccagcatcaaggttccagtggag
gaccccccacccacacactcagatcctgaagagcctgaagagcctgtctcaccggcccat
gtcccctcgcccagcagagagaaggccagaaagaaagctttcaaaccccccaagcctccg
aagcctcccaaaccccccaagatgcctaaggcccccaagcctccaaaggtgcccaaggtc
aaggaaggaggaaagaagaaagcgaaaaaaattcaggagtcgtcgtcgtcgtcgtcgtcg
ccgccgcctcccaaaccctccagctttgcagctcttgagtcccatgccaaagacatcttg
agcaaaatggaccagcccaaaaagacaaggctgttaaaaacggtcctgagtatatcggag
aaggaaatatcgaagcagaaaaacgcagaaaagtttgaattcagagagcagaataaaaac
aagacggaagcaaaatggaagtataagaatagtaaaccagattccctgctgaaaatggaa
gaagattgcaaatttgacagaacaccactgtcaggcaataaagacagattcagcttcacc
atgtctcacaagaagacgctgggctccaagatgctgaaacctcagaccaactcaagtgtg
tttggatcattacaaaacctaaaagaggacaaatccaagccggtgagagacgagtacgag
tacgtctcagatgagggggagctgaagattgacgagttccccatcaggcggaaaaagaac
gcggtcaagagagatctgtcctttttgtcggacattaaagaacccattcaaccagccaag
aaaccaaagtttcagcccttggtgaaaccgagcgtggactcttcagatgaagagactctg
cacatagacacagaggtcaagcctgaggtgaagagtcgcaactctaaggtcaagaaaaag
ggcggaagcgctgcagggattcttgacctcctgcaggcgagcaagcaagtgggagggatt
gactacagcaccaacagtcagccacctgcatctcccagcacacaggaggccattcagggc
atgctgtccatggccaacctgtcgtcttcagacagcctgcagcagccgtggagcagccag
tccaagagcaactcccacagcacgccggccggcaggaaggcgggcgggggggcgggcggt
ggcaacagcaagcgacccaccaaacggctccctaagaaacccaggaaaagcagcagcatt
gagagtctggattacgatgacgaccaggaccacatggacgcgtgtttcaaggactctgat
tatgtttatccctcgttggagtctgaagaggataatccggttttcaaatccagatcaaaa
aaacgaaaaagcagtgacgacactccctacagcccgacagcgcgggtaggaccctcggtt
cctcggcaggagaggccggcgagagacggggcgcgcgtggcctccatcgagacggggctg
gccgcagctgcagcaaagctttctcatcaggaggagcagcagaagaataagaagaagaag
aaaagcaccaaaaagaaggcaatagtaatcgaggagccgccgaaagcctctcaggacagc
agctcgccggagcacactgtggacgacggcagcctgacggaccctgagttcaacacaggg
acagtaaagtcgccaggggggccgcagcccatggcgcccggcgtttttctgagccaaagg
cgaccttcgatttcttctcccaacaacagcagcaactccatgagcaccaccagcagcagc
atggccaaggtggagcgcggggtgtcggcagacgccaaagcgaagcggctaaagaaaggc
atggcaacagccaaacagagacttggaaagattttaaagatccatcggaatggaaagctc
ctcctgtag
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