Pseudochaenichthys georgianus (South Georgia icefish): 117446580
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Entry
117446580 CDS
T09629
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117446580 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117446580 (usp4)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117446580 (usp4)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117446580 (usp4)
Ubiquitin system [BR:
pgeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117446580 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
SH3-C_UBE2O
Motif
Other DBs
NCBI-GeneID:
117446580
NCBI-ProteinID:
XP_033938741
LinkDB
All DBs
Position
5:complement(21102889..21115175)
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AA seq
1044 aa
AA seq
DB search
MSSALKLAPVSAPLPYARSRYRHTHCMMAEGGGPEPGGAADSDSEPVAAQMPTPSTENQK
QTIGSLLKTTLRKGDEWYLIDSRWFKQWKKYVGFDNWDMYNVGERSLFPGPIDNSGLFSD
QETQSLKEHLIDELDYVLVPTEAWNKLVSWYSCLECQRPIVRKVVEHGMFVKHCKVEVYL
LELNLCENDNMDNVVTRHFSKADTIDTIEKDMRTLFNIPSEKETRLWNKYMSNTYEQLNK
PDSTVQDAGLFQGQVLVIERKNDDGTWPRQASHPKSSTTPSRNFTTSPKLSSNSTASISS
TVTNGDSSPGYTLNNSTSSGNRLGGYNSYSSSYNYRESQSQPGLCGLSNLGNTCFMNSAL
QCLSNASPLTEYFLEDHYEAEINRENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKT
QVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVRKKPYLAVRDDDGRVDEIVAKEAWT
NHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSD
PQSRPTQYRVVVPKLGSVTDLCSALSKICGFPSENMVVADVYNHRFHKIYRRDDGLNQIM
EKDDIFVYEVQEEDSEKMNLPVYFRERHSKHAGSSSSTMLFGQPLLITVPRHNLVADVLY
EKILERIGRYVKQSPTPNGESRASPSASATAASASCSQAPECSTASNANASMGGCGSPLS
GGASCSASSSNGSSHSGACHETNGVYDGDEAMDHQVSPEPENGHSEEEEEEASDLENGSK
GDTPKKNSSPKKNSSPARLFSFSIVNSYGTANISPLPCDGNVLKLNPHSTVAIDWDSESK
KLCYDEQEAEAYEKHESMLQPQKKKATVALRECTELFTTMETLGEHDPWYCPTCKKHQQA
TKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIRDLNMSEFVCDPKAGPFMYDLI
SVSNHYGGMGGGHYTAYGKNKVDGKWYYFDDSSVSSASEDQIVTKAAYVLFYQRRDEEAP
SSKPQPSASLGGAPEAAEDHMDTN
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgctctgaagctcgccccagtcagtgcgcctcttccatacgcgcgttcacga
taccggcacactcactgcatgatggccgagggaggaggacccgagccgggtggcgcggca
gattctgactcggagccggtagcagcacaaatgccaaccccttcaaccgaaaatcaaaaa
cagactattgggtcacttttgaaaacaactctgagaaagggtgacgaatggtatctaatc
gacagccggtggttcaaacaatggaagaagtacgttggatttgacaactgggacatgtac
aatgttggagaacgtagcctctttccaggaccaattgataactcggggctcttctcagac
caggagactcagtccctgaaagagcacctcatagatgagctggactatgtccttgtaccc
actgaagcatggaataagcttgtgagctggtacagctgccttgagtgccagagacccatc
gtcaggaaggttgttgaacatggcatgtttgtcaagcactgtaaagtggaagtctatttg
ctggagctgaacttgtgtgagaatgacaacatggacaatgttgttacacgtcatttcagt
aaagctgatactatagataccatagagaaggatatgaggacgcttttcaatataccatcg
gagaaggagacacggctctggaacaaatacatgagcaacacctacgagcagctgaataag
ccggacagcactgtacaggatgccggactcttccagggacaggtgcttgtgattgagcgg
aagaatgacgacggcacgtggcccagacaagcgtcccatcccaaatcaagtacaacccca
tccaggaatttcacaacctccccaaagctctcctccaactcaaccgccagcatctcctcc
acagtgaccaatggagacagcagccctggctacacactcaacaacagcacctcctctggc
aacagattgggaggctacaattcttacagttcctcctacaattacagagagtcgcagtca
cagccgggcctgtgtggtctcagtaatttgggcaacacctgcttcatgaactctgccctc
cagtgcctgagcaatgcatccccactcacagaatacttcctcgaagaccattacgaggca
gagattaaccgagagaatcccctgggcatgaggggcgagatagcggaggcctatgcagat
ctagtgaagcagatgtggttgagtcgcagcagctatgtggccccacgtaccttcaagacc
caggtgggccgttttgcccctcagttttcaggctaccagcagcaggactcgcaggagctg
ctggccttcctgctcgacggactccatgaagatctgaaccgcgtcaggaagaagccttac
ctggccgtaagggatgatgacggacgggtagatgagattgttgcaaaggaagcttggaca
aaccaccgcttgcgcaacgattctatcatagttgatattttccacggcctcttcaaatcc
actctggtttgcccagagtgctccaaggtgtctgtgacctttgaccccttctgctacctc
acactgcctctgcccatgaagaaggaccggactatggaggtgttcctggtgcgatcagac
cctcagtccagacccacacagtatcgagtggtggtcccaaaactgggttcagtgacagac
ctgtgcagcgccttgtccaagatctgtggattcccctctgaaaatatggtggttgctgac
gtttacaatcataggttccataaaatatacagacgggatgacggcctgaaccaaattatg
gaaaaagatgacatctttgtgtacgaggtacaggaagaggacagcgagaagatgaacctg
cctgtgtatttcagagaacgccactccaagcacgcaggaagctccagcagcaccatgctg
tttggtcagcctttactcatcaccgtgcccagacacaacctcgtggcagacgttctgtat
gaaaagatcctagagaggattgggcgctatgtaaaacaatccccgaccccgaatggtgag
agcagggcctcgccctcggcctcagccacagcagcctctgccagctgcagccaggctcca
gaatgttccacagcgtctaatgccaacgccagcatgggtggctgcggcagcccgctgtca
ggcggggcctcgtgcagtgccagctccagtaacggcagcagccactcaggggcctgccat
gagactaacggggtatacgatggtgatgaagccatggaccaccaggtgagtccagagcca
gagaacggccactccgaagaggaggaagaggaggcgtctgacttggaaaatggctccaaa
ggagacacacccaagaagaactcttcacccaagaagaactcttcaccagccaggctcttc
tcttttagcatcgttaactcctacggaacagctaacatcagcccgctgccctgtgatgga
aatgtcctcaaacttaatccacattccacagtggcgatcgactgggactcggagtcaaag
aaactgtgttacgacgaacaggaagcagaggcctatgagaagcacgagagcatgctccag
ccccagaagaagaaagccactgtggctctgagggagtgcacggagctctttaccaccatg
gagacgctgggagaacacgacccatggtattgtccaacatgtaagaaacaccaacaggcc
acaaagaagtttgacttgtggtcgctgcctcgcattctggtagttcatctgaagcgcttc
tcctacaaccggtgttggagggacaagttggacaccgtggtggactttcccatcagggat
ctcaacatgtcggagtttgtgtgcgaccccaaggccggccccttcatgtatgacctcatc
tccgtgtcaaaccactatggaggaatgggagggggtcactacacggcgtatggcaagaat
aaagtggatggaaagtggtattactttgatgacagcagcgtctcctctgcctcagaggac
cagattgtgactaaagcagcctacgtgctgttctatcagcgcagagacgaggaagccccg
tcctccaaacctcagccctcggcctcgctgggaggagcccccgaagcagccgaggatcac
atggacacaaactga
DBGET
integrated database retrieval system
