Pseudochaenichthys georgianus (South Georgia icefish): 117446653
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Entry
117446653 CDS
T09629
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117446653 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117446653 (taf4a)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117446653 (taf4a)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117446653 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
117446653 (taf4a)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117446653 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
117446653
NCBI-ProteinID:
XP_033938858
LinkDB
All DBs
Position
5:complement(8015422..8033764)
Genome browser
AA seq
832 aa
AA seq
DB search
MDAPTHSTDSSSGHEPGKTLVVSDGVTYLPNHQGKVVHTFNGSHTMDSHNSGSVGATATS
GTTNNSSNAISVPAFNSGPGVSKGLLGAATMHPSSNSVIQTPLMNSQTALSPATTGATVT
LVRPPMQTTGSGATLNGNNNASHAAVVANALGYTGTIGSHSPLVNNASSAGSHIIKAEPP
TTIIQTAPQPAVTPGVVSSPRFPTTGAPGPGLIRAFAPQMLAPRLQQTSPGQPSVHNIQL
PPGMVLVRSESGQLLMIPQQALAQMQAQAQGGMAPRTATPTSVPPVQAPGNTIISRQVAP
STIIRQGGPTPTPLSATTTLHRPPVLQSSVGATVTGMTPRTASPSAGSQLAPISVSKETM
ENVKKCKNFLSTLIKLASTGKQSTETAANVRELVKDLLEGRLEAEEFTSRLYKELNSSPQ
PYLVPFLKRSLPALRQLTPDSAAFIRLSQLPVPACSMVPSTSPVPTSVVLGSPSPRLMTP
VSRPQLQTGISKPGPAPSLVIHPQQQRTMLRPQVALATPTMVAHRNQAPGRIMLGQQHAQ
LQPVPVKTEGSPFPRQASAAALTLAQRNKLREAGGLFKDDDDINDVASMAGVNLSEESAN
ILATNSGLVGAVTRSCKDEAFLSCALLQRRMMEIGRKYGVTDLGADVVTFVSHATQQRLQ
TLLEKVSQVAQQKSYSIKEDDSYEQSSDVRAQLKFFEQLDQQEKQRKEEQEREILLKAAK
SRARQEDPEQLLLKQKAKEMQQQELAQVRQREANLTALAAIGPRKKRKLLDSQSSSAAAE
GSGSGPSLSGGASGSRPTRQRITRVNLRDLLFCLENERFSSHSHFLYKGFLK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaccgacgcacagcacagactccagctcgggacacgaacctggcaaaacactt
gttgttagtgacggagtaacttatctccccaatcaccaggggaaagtagtgcatactttc
aatgggagccacactatggactctcacaattcaggaagcgtgggggcgacagcgacaagt
ggcactactaacaacagcagcaatgcgatatctgtccctgctttcaacagtggaccgggg
gtctcgaaagggctgctcggtgctgctacaatgcacccctcgtccaacagtgtcattcag
acgccgctcatgaactcccagactgctttgagcccggcaacaacaggagccactgtgaca
ctcgtcaggccgcctatgcaaaccacggggtcgggagcaactttgaatgggaacaataat
gcgagccatgctgctgtggtggccaatgcattgggttacacaggcaccatcgggtcacac
agcccgcttgtgaacaatgcgtccagcgcaggctcgcacataatcaaggcagagcccccc
accacaataatacagacagccccacagccggctgtcactccgggggtcgtcagctctccc
cggttccccacgacaggagctcccggtccaggcctgatccgagccttcgcgcctcagatg
ttggcccccaggctccagcagacctccccgggacagcccagcgttcataacatccagcta
cccccggggatggtgctcgtacgcagcgagagcggacagctgctgatgattcctcagcag
gctctcgcccagatgcaggcccaggctcagggaggcatggcaccacggaccgccacacca
acaagtgtacctcctgttcaggctcctggaaacaccatcatcagcagacaagtggctccc
agcaccatcatccgccaggggggtccgaccccaacacccctctctgcgaccaccactctt
cacagaccccctgtccttcagagttcagttggggctacagtaacaggaatgacccccagg
accgccagcccgtcagctgggagccagcttgccccgatatcagtgagcaaagagacgatg
gagaatgtgaagaaatgtaagaacttcctgtccacactgatcaagctggcctccactggg
aagcagtccacagagacggcagcgaatgtgagagagctggtcaaagacctgctggagggc
agactggaggctgaggaattcaccagcagattgtacaaagagctcaactcctccccccaa
ccctaccttgtgccttttctcaagagaagcctccccgccttgaggcaactcaccccagac
tcagcagccttcatccggctgagtcagctcccggtgccggcctgtagtatggtcccctcc
acctcccccgtccccacctcggtggtcctgggcagcccttctccccgcctcatgaccccc
gtcagcaggccccagctccagacaggcatcagcaaaccaggacctgccccctcactggtt
atccatcctcagcagcagagaacaatgttgagacctcaggtagccttagcgacgcccacc
atggtggcccacaggaaccaggcccccggccgcatcatgctgggccagcagcacgcacag
ctgcagccagttcctgtgaagacggagggttcaccttttccgaggcaagcctctgctgca
gcgctgaccctcgctcagaggaacaagctgagagaggcggggggcttgttcaaagatgat
gacgacataaacgatgtggcctccatggccggagtgaacctctcggaggaaagcgctaac
atcctagctaccaattctggtctagtgggagcggtgacgcggtcctgtaaggacgaggcg
ttcctgtcctgcgccctcctgcagaggaggatgatggagatcggcaggaagtacggtgtg
accgacctgggggccgacgtggtgaccttcgtctcccacgctacgcagcagcggctacag
accctgctggagaaagtgtcccaagtagcccagcagaagagctactccataaaggaggac
gacagttatgagcagagcagcgatgttcgtgctcagctcaagttctttgagcagctggac
cagcaggagaaacagaggaaggaggagcaggagagggagatcctcctgaaggcagctaag
tctcgagctcggcaagaggaccccgagcagctgcttctgaaacagaaggcgaaagagatg
cagcagcaggagctggctcaggtgaggcagagggaggccaacctgacggctctcgctgcc
atcggaccgaggaagaagaggaagctcctggactctcagtcgtcctcagctgcagccgag
gggtccgggtcaggtccctccctctccggcggggcttcgggctccaggccgacgcggcag
cgaatcacacgcgtcaatctcagggacctgctgttctgtttggagaacgagagattttcc
agtcactcccatttcctctacaagggctttctcaaatag
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