Pseudochaenichthys georgianus (South Georgia icefish): 117446672
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Entry
117446672 CDS
T09629
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117446672 (tmf1)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117446672 (tmf1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
117446672
NCBI-ProteinID:
XP_033938884
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All DBs
Position
5:8683293..8700034
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AA seq
1157 aa
AA seq
DB search
MSWFNSSLSSFAKQALTTAQKSIDRVLDIKEEDQWGDTVVMPYDDVTIPGKLSLSGGWGM
TPWEAPPEERPITPPPSSEAITTPVTRTVVDESENFFTTFLPPGDVQGVTVSQVVSVPPT
KSQRRPQEKENQSRETVAHEEENSAPADETLEYQTDDEDQMVDLDSSAESRYSDTILLQP
VSPAPSPSDLPDSEMSDVQTDIGSTVSVDSTPEQSQPPCDLQVEQDTTDSCEPAAVTSEL
QSSTPPDPSPSLPSKEILLENKDSKVEDRQSDTPSPPVSAFSSGTSTTSDIEVLDHESVL
SESSASSRQETGEGKADLHLMQGSFQLLTASTCGDFPHLEDYSKLTESCGSSSDAFERID
SFSVQSLDSRSVSEVNSDDDIPGSRTLASVTTGSPPLTVSSAVCQTQEDGEEENLGQEEE
EEEEEEEEGYTDTMREQSLDEMEESGRSATPVNSDQPEDLMEQEQDSEANVTLSDPASNA
DEQIAPPITAEMKSVSPVQILELQKVIDDLSGRLEKRESQLLVVSKDKATLEEQCDNLKD
EVISLKEDSSTVQSLKDEFTQRIADTERKAQLACKERDIAKKEIKGLRDELSTRLHSSDT
LEIIREKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRVKEKESDTRITKQQKKIKEQEEEL
RQLQQVLDGKEEVEKQHRENIKKLNAVVERQEKDVSQLQTDSEELQENNRSLQAALDNSY
KELAELHKAGVSRASEAQEAALTRETQAKDLLSLALEKNQEEGRMQQEALANQVADLRMA
LQRAEQQQGRKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQASLGG
QTASWEKLEKSISDRLADAQAQLAVAVERERSASEELLSIRSQQASLESQISLFRQEKAR
LVAQLEAEKNKRDKLEDESTREHVDLENLRGEHNRMLEETKKEKLLLTNQLEMERMKVEQ
EKKKCYLANEALREKERKAMTHSVGEPPASSTPSLSRSSSISVPDNAALHSSILSQEDLL
DHSLGNMTMSMSMSGTNLYEAARLSGGSSIMENLQSQLKLREGEIAQLQIEISSLERSRS
VMAEELVRLTNQTEEMDEMVKEIPTLKVHLKDLQQRHNTILQMYGEKAEEAEELRLDLID
VKNMYKCQIDELLKNQK
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaactcctctctgtccagcttcgctaaacaagctttaacaacagctcag
aagtcaatcgaccgagttctggacatcaaagaggaggaccagtggggtgacacagttgtc
atgccctatgatgatgtaacaatacctggaaagctgtcactgagtggaggatggggaatg
acgccgtgggaggcgccccctgaagagaggcccatcactcctcctccttcctctgaggcc
atcaccactcctgtcacccgcacagttgtggatgaatcagaaaactttttcactaccttt
ttgccacccggagacgtccaaggcgtcaccgtctcccaggtagtgtccgtaccacctact
aagtcgcaaaggcggcctcaggagaaggaaaaccaaagcagggagactgtggcgcacgaa
gaagagaattcagcacctgcggacgagaccctggagtatcagacggatgatgaagaccag
atggttgatctggattcctcagcagaatcccgttattcagacactatcctcctgcagcca
gtttctcctgctccttctcccagcgaccttcctgacagcgaaatgagcgatgtacaaaca
gatatcggctctacagtttccgtagactccacaccagagcagtcacagcctccatgcgat
ctccaggtggagcaggacaccacagattcctgtgaaccggctgctgtcacttctgaactt
cagagctctactccccctgatccttcgccctctctgccctctaaggaaatactcctagag
aataaagactcaaaggtggaggaccgtcaaagtgataccccctctcctccggtcagcgct
ttctcctcaggaacctccaccaccagtgacattgaagtgcttgaccacgagtcagtgttg
agtgagagctcagccagctccagacaagaaacgggggagggcaaggccgaccttcacctg
atgcagggctcctttcagcttctcacggcctccacctgtggagatttcccccacctggag
gactactccaaactcacggagagctgcggctcctcctcggacgcattcgagcgcatagat
tcattcagtgttcagtcgttggacagccggagtgtgagcgaggttaactcggacgatgac
atccccggcagtcggacgctagcgtctgtcaccacgggctctcctcctttgacagtgtcc
tcagctgtgtgtcagacgcaggaagatggagaggaggagaatttaggacaggaggaagag
gaggaggaggaagaggaggaagagggctatacagacacaatgagggagcagtcgctggat
gagatggaggagagtggccggagtgcgacgcctgttaatagtgatcagcctgaagacttg
atggagcaggagcaggactctgaggcgaatgtcactctgtctgatcccgcctccaacgct
gacgaacagatcgctccgccaatcactgcagagatgaaaagtgtctccccagttcagatt
ttggagcttcaaaaggtgattgatgatctgtcaggccgcctggagaagagagagtctcag
cttctggttgtcagcaaggacaaggccacgctggaggagcagtgtgacaacctcaaagat
gaagtgataagcctgaaggaggacagctccacggttcagtccctgaaggatgagttcact
cagcgcatagcagacacggagaggaaggctcagctggcctgcaaggagagagacatagcc
aagaaggaaataaagggcttgcgagacgagctttctacaagacttcactccagcgacaca
ctggagatcatcagagagaaggaagagcagatcagaggcctgctggaagaaggtgagaag
ttgtccaagcagcagctgcagcacagcaacatcatcaagaagctgcgtgtgaaagagaag
gagagcgacacaaggatcacaaagcaacagaagaaaatcaaggagcaggaggaggagctc
aggcagctgcagcaggttctagatgggaaggaggaggtggagaaacagcacagggagaac
atcaagaagctgaacgcggtggtggagcggcaggagaaggatgtgagccagctgcagacg
gactctgaggagctgcaggagaacaaccggagcctgcaggcagcgctggacaactcctac
aaggagctggcagagcttcacaaggcgggggtcagcagagccagtgaggctcaggaagcg
gctctcaccagagaaacacaggccaaggatctgctgagcctggccctggagaagaaccag
gaggagggcaggatgcaacaggaggctctggccaatcaggtggcggacctgaggatggct
ctgcagagggctgagcaacagcaaggaaggaaggaagactatctgagggaggagatcagt
gagctgcagcagaggcttcaggaggcagagaccaggaaccaggagctcagccagagtgtt
acctcggcaacacggccccttctgcgacagattgagaacttgcaggcctccttaggcgga
cagacggcatcctgggagaaactggagaagagcatctctgataggctagcggatgcccag
gcgcagctggccgttgcggtggagagagagcggtcggcgagtgaagagctcctatccatc
aggtcccagcaggcctctctggagtcacagatctccctgttccgccaggagaaggcccgg
ctcgtcgcacagctggaggctgagaagaacaagagagataaactggaggatgagagcact
agggagcatgttgatttagaaaatctgcgaggagagcacaaccgcatgctagaagaaacc
aagaaagaaaagctgctgctgaccaatcagttagagatggagaggatgaaggtggagcaa
gagaagaagaaatgctacttggctaatgaagctctcagggaaaaggagaggaaggccatg
actcactctgtaggagagcccccggcgtcctccacaccctccctgtcccgctccagctcc
atcagtgtgccggacaacgctgctctccactcctctattctttcccaggaggacctttta
gaccactctcttggtaacatgaccatgtccatgtcgatgagcgggaccaacctgtacgag
gccgcccggctgtcggggggctccagcatcatggagaacctgcagtctcagctcaaactc
agagaaggagagatcgctcagctgcagattgagatctccagtctagagaggagtcgttct
gtgatggcagaagagctggtccgactgaccaatcagaccgaagagatggatgagatggtg
aaggagattcccacgttgaaagttcatctcaaggatctgcagcagaggcacaacaccatc
ctgcagatgtacggagaaaaagccgaagaggcagaggagctgagactggacctgatagac
gtgaagaacatgtacaaatgccagatagacgaactgctgaagaaccagaaataa
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