KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117446683
Entry
117446683         CDS       T09629                                 
Symbol
wdr1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pgeo04990]
    117446683 (wdr1)
Domain-containing proteins not elsewhere classified [BR:pgeo04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   117446683 (wdr1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_Aladin ASA1 CFAP251_N DSE1_N Beta-prop_IFT140_1st Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N eIF2A Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_VPS8 WDR90_beta-prop_4th WD40_like TRM82_WD Beta-prop_ACSF4 Beta-prop_WDR11_1st PAC11 Beta-prop_RIG_1st WD40_RFWD3 WD_LRWD1 WDR54 DUF5711 PROPPIN Beta-prop_DCAF12 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 117446683
NCBI-ProteinID: XP_071059181
LinkDB
Position
5:complement(10436084..10451636)
AA seq 606 aa
MPYELKHVFASLPQMERGVAKVIGGDPKGNNFLYTNGKCVIIRNIENPAIADIYTEHAHT
VTVAKYAPSGYYIASGDASGRIRIWDTTQKEHLLKYEYTPLSGKVKDIAWTEDSKRIAAV
GDGREKFGAVFLWDSGSSVGELSGHAKLINSVDIKQTRPYRLALASDDTCGSFFEGPPFK
FKFTMREHSQFVNCVRFSPDGNRFVTAGADGQMFLYDGKDGNLISTLGGEKAHKGGIYAI
SWSPDSSQLISASGDKTVKLWDVGAETAITTFNLGSDVTDQQLGCLWQNEHLLTISLSGY
INYLDKNNPDRTIRTVKGHSKSIQCVTVHKKDGRPHIYSGSHDGHINYWDAETGENDCFS
GKGHSNQVSQMVTNDSSELVTCSMDDTLRYTNINKTEYSASDVVKMDFQPKSVSVAAGGL
SLAVCIGQVVLLKNKKKVFTMDNLDYEAEVGALHPGGSTAAVGGADGKVRLYSVQGNTLK
DEGKTIELSGAITDMAYSNDGAYLALIDDKKVTSVFTVADDYSVKNNFYGHHAKPVTLAW
SPDNEHFATGGMDMMVFIWTVSDPDKRIKVPDTHRLHHVSGLAWVDEHTLVTTSHDASIK
QWTIKY
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgccgtatgaactgaaacatgtgttcgccagtctcccacagatggagaggggagtcgca
aaagtgattggtggcgatcccaaaggcaataacttcctgtataccaacgggaagtgtgtc
atcatcaggaacattgaaaacccggccatagcagacatttacaccgaacatgcccacaca
gttactgttgccaagtatgctcccagcggatactacattgcatctggagatgcatcaggt
aggatccgtatctgggacaccacccagaaggagcacctgctcaagtacgagtacaccccg
ttatcaggcaaggtcaaggacattgcatggaccgaggacagcaagaggatcgctgctgtt
ggggacggacgagagaaattcggtgccgtgttcctgtgggactccggctcctcagttggg
gaactttccggccacgccaaattaatcaacagcgtagacattaagcagacacgcccttac
cgcctcgccttggccagtgacgacacctgcgggtccttcttcgagggccctcccttcaag
ttcaagttcacaatgcgcgagcacagccagtttgtcaactgtgtgcgtttctctcctgat
ggaaatcggttcgtaacagctggagccgatggccagatgttcctctatgatggaaaagat
ggtaatctcattagcacactgggaggagagaaggcccacaaaggaggaatctatgctatc
agctggagccccgacagctcccagctgatctccgcctcaggggacaagacggtgaaattg
tgggatgtcggagcggaaacggccatcaccaccttcaacctgggctctgatgtgaccgac
cagcagctgggctgcctgtggcagaacgagcacctcctcaccatctccctgtcagggtac
atcaactacctggacaagaacaacccggaccggaccatccgcaccgtcaagggtcacagc
aaatccatccaatgtgtgacggttcacaaaaaagacgggcgacctcacatctactctggg
agtcacgatggacacatcaattactgggatgctgaaactggggagaacgactgcttctca
gggaagggccacagcaaccaggtgagccagatggtgaccaacgattccagcgagctggtg
acgtgcagcatggacgacacgctgcgctacaccaacatcaacaagacggagtacagtgcc
tctgatgtggtgaagatggatttccagcctaaaagtgtgtctgtcgcagcaggagggctt
tctctggccgtctgcattggacaggttgtcttgctgaagaataagaagaaagtcttcaca
atggacaatctggactacgaagcagaggttggagccctccacccgggggggtccactgca
gccgtggggggagcagatgggaaggtccgtctgtactccgttcagggcaacactctgaag
gacgaggggaaaaccatcgagctctcaggagcgatcaccgacatggcctactctaacgac
ggggcctatctggctctcatagatgataagaaagtcacctccgttttcaccgtggctgac
gactactcggtcaaaaataacttttacggacaccacgccaaacctgtgactctggcctgg
tcacctgacaacgagcactttgccaccggtgggatggacatgatggtgtttatctggacg
gtttccgatccagacaagaggattaaggtcccagacacccaccggttgcaccacgtcagc
ggcctggcctgggtggacgagcacactctggtcaccacctcccacgatgccagcatcaag
cagtggactatcaaatactga

DBGET integrated database retrieval system