Pseudochaenichthys georgianus (South Georgia icefish): 117446714
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Entry
117446714 CDS
T09629
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117446714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117446714
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117446714
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117446714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
KH_DTX3L
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
Siva
RING_XB3-XBAT31
zf-RING_5
Baculo_IE-1
zf-RING_11
Arabino_trans_N
zf-C3HC4_4
zf-RING_10
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117446714
NCBI-ProteinID:
XP_033938954
LinkDB
All DBs
Position
5:22672158..22676952
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AA seq
659 aa
AA seq
DB search
MANNEPEDMDVDENNFQPTPSPTPTDTSTKVEYSDGSYIQQTSPSTTTDTSTKALMASSR
DKDGVQAILSFKWLEVVPLQKCQHNLQKVLQTWSNTNNLNADCKVLKVSEDGRVEIRLTP
ASGKPIPASEVQKLSGQALQGKDGKTVRILSVTLTPPQLETQQPSTNLPPSQDVDVPPEE
QSSSVSTEEEKKEEVACSLSVGPYWYVSHIYKKEMERIEKENGVQITADVKITFEATKDG
SPEKALSEFTSLVQKYSSDLEASHIPLKHVDPEGLKEVMITKRIGSKLLLTLTPEEMISW
GPRQSQDTFRKSTQKMLNISTSVVESGEVSQDTSQNIGMSIKDPLVNAGLTMEENYWKLM
TTSYVKHVAKIKTKFGVDFKESGISQGKVEVKVCYKRAGENASMESHAIRALLNLYQKIA
TSPLSFSHLAGATGFRGSPENLSNAGPSEGGTVWNGTSGNYTEAPRGGGATAGDNQDDTC
SICLDTFQNKKQLKCKHEFCEACLEMSKASMGPICPLCKDVFGMMEGDQPDGEMTTEKST
NHLNGFRGCGTIIINYIIPDGKQTAKHPNPGKYLSSCKRTAYLPNNKEGREVLHLLERAF
KQKLIFTVGTSRTSGMEDVVTWNDIHHKTNTFGGPHNFGYPDPHYLDRVREELKAKGIE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaatgaaccagaggacatggacgttgacgagaataatttccagccaactcca
agcccaacacctactgatacgtccactaaggttgaatacagtgacgggagttatatccag
cagacttccccctcaacaacaactgatacgtccactaaggctctcatggcttcatcacgg
gacaaagatggcgttcaagccattctctcatttaagtggttagaagttgttccactgcag
aaatgtcagcacaacctgcagaaagttctgcagacttggtccaacaccaacaacctcaat
gcagattgcaaagttttaaaagtctcagaagatggtagagttgagatacgtcttacaccg
gcttcaggcaaacccattcctgcgagtgaggttcagaaacttagtggacaagcactgcag
gggaaagatgggaaaacagtcagaatactgtctgttactctgacaccgccacagcttgag
acacaacaaccatcaacgaaccttcctccttcacaggatgtagatgtgccaccggaggag
cagagcagttcagtttcgacagaagaagagaagaaagaagaagtggcatgctctctctca
gtgggcccttactggtatgtgagccacatctacaagaaggaaatggaacgtatagagaaa
gagaatggtgttcaaatcacagcagatgtaaaaattacatttgaagcgacgaaagatgga
agcccagaaaaagctctctctgagtttacaagcctcgtccagaagtactcaagcgattta
gaagcctcacatattcctctcaagcatgtagatccagaagggttgaaggaagtgatgata
actaagaggattgggagcaagcttttgctcactctaacgcctgaagaaatgatctcatgg
gggccaagacaaagtcaagataccttcagaaagtcaacacagaaaatgttaaatatcagc
acttctgttgtagagtctggagaggtgtctcaagacacatcacagaacattggcatgagc
atcaaagaccctctggtcaatgctgggctaaccatggaggagaactactggaagctgatg
actacctcctacgtaaagcatgtagctaagatcaaaactaagtttggtgttgattttaaa
gaatccggcatcagtcagggcaaagttgaagtcaaagtttgctacaaaagagctggagaa
aatgcgtcaatggagagccacgctataagagctcttcttaatctctatcagaagattgcc
acatcaccactgagcttcagccatctcgctggtgccactgggtttagaggttcaccagaa
aacctgagcaatgctggtccatcagagggaggaactgtgtggaatggaacatccggaaac
tacactgaagcacccagaggagggggagcaactgcaggagataatcaagatgacacctgt
tctatatgcttggatacatttcaaaataaaaaacagcttaaatgtaagcatgagttttgt
gaggcttgcctggaaatgtcaaaagcgtccatgggacccatctgtcctctttgcaaagat
gtatttgggatgatggagggagaccagcccgatggagaaatgacaacggagaagagcacc
aaccatctcaatggattccgaggctgcggcactatcatcatcaactatattattccagat
ggaaaacagacggcaaagcatccaaatcctggaaagtacctttcttcttgtaaaagaaca
gcctacttgccaaacaacaaagagggcagagaagtgctgcacctgttggagagagcgttt
aagcagaagctaattttcacagttgggacgtccagaacatctgggatggaggacgtggtg
acctggaacgacattcaccacaagacaaacacttttggaggaccacacaattttgggtat
cctgaccctcactacctggacagagtcagagaggagctgaaggctaaaggcatcgagtga
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