Pseudochaenichthys georgianus (South Georgia icefish): 117446717
Help
Entry
117446717 CDS
T09629
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117446717 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117446717 (usp43a)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117446717 (usp43a)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117446717 (usp43a)
Ubiquitin system [BR:
pgeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117446717 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117446717
NCBI-ProteinID:
XP_033938964
LinkDB
All DBs
Position
1:complement(30589798..30708487)
Genome browser
AA seq
1231 aa
AA seq
DB search
MDTRKENKVRKAMKPKTTKRKEKKYKTGRFARRKSLRSFGNFMGRILKTLGTFAHFGDAE
TPDAEDDDGGFGRTASGGFRDDSGQTSREGTVKKSSTVSSSTHGSVKDRLSWCFGDKTPG
VLGLKNHGNTCFMNAVVQCLNNTDLLAEYLGLEQYKSDLYQRRVNGDVRGEEPLPARGEV
TEQLATLVRGLWTLEYTPQLSVEFKSIVAKYGSQFRGNSQHDALEFLLWLLDRVHEDANE
SPNNTTNGSSSKTKANAKGPSSSEHPSSPSSVGTQQPRDRHSFVQEHFQAQYRSSLTCPH
CLKQSNTFDPFLCISLPITLRQTRSMCVTLVFSTKGQRYLRVGLAVPLFGSLSCLRSMVA
QEGNISPDQVILSELYSTGFQRSFSDDDDMTVIADSDVIYAFQAPPLHSRGGSTPHSGYH
HSLPSSPYTSNAGPDGQRLPSSGTLSSEYLNQGGSTKVLLVICNTAGSGQQAVRFGPPFL
MREDRSISWDQLQQSILSKLYYLMLNGSQAQNAGMLFKIRVVGGSSNYSYLSPQDSRPLY
HTAVDRALKFCGPGGPPHVKVVIEWENKIKECLFGSIQEEVVKDAESVRNQKQQHLQQHS
CTLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERR
NKLSTLVRFPLTGLDMAPHVVKRTQSMKNLNLGAWPPPWKQSSGQHQPDLTLPQDALYDL
YAVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDMVPEEEVCTRGAYILFYQRRNLIP
PWSASCSVRGSTSSSMSDHWLIRLTGDSQRGSMVSRSSTTCPSSLPDSPESPVFFENGSK
EERGGFDSRPFIRGLQGRSVSMRAPSKTRETLSKVFPLRWSFGSKDRRKPDPVPPAVQDP
APVELVQYLESGRRPRCTKDPIATLMNEPRSAREASEGRASANVRSSSVGSLSCLNKAGD
GLPLESTKVPEGQRRPSDKTASLRRSKGSQPRDDRTTNISSSSSSNTLTRRKDDRKESSS
KACQDTETKRSSSAGVQSSCSTPSLQDGTLRRQKGDRADTQGAYEGNSKTKKEEVPRNHE
GLLSFFKGSFLKKDRDSRKSKEGESGRGAGEEGGRRTLSKSSLSNGAAAAAGGGTELEVH
KSNGSGHRGDELANGKVGRTTADIKRSQSSSNIPIKAEQSMRRTASLHRNGMSTAPSRSL
ATDKPPHGTLQRTRYSTTSLGRKKTVPESSF
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggatacccgcaaggaaaacaaggtaagaaaagctatgaaacccaagacgacaaagcga
aaggagaagaaatataaaaccggaagatttgctaggaggaaatcgctgcgatcttttggg
aatttcatgggaaggattcttaaaactttgggcacttttgcgcactttggcgacgcggaa
acgccggacgcggaggacgacgacggcgggttcgggcgaaccgcttctgggggtttcaga
gacgacagtgggcagacctccagagagggaaccgtgaagaagagttccacggtgtcctcc
tccactcacggctcggtgaaagacaggctgtcgtggtgcttcggcgacaagacccccggt
gtgctggggctgaagaaccatggaaacacctgtttcatgaacgccgtggttcagtgcctc
aacaacacggacctgctggccgagtacctcgggctggagcagtacaagtcggatttgtac
cagaggagggtgaacggggacgtgaggggcgaggagccgcttcccgccaggggagaggtg
accgagcagctggcgacgctggtccgaggcttgtggaccctggagtacacacctcagctg
tcagtggagttcaagagcatagtggcaaagtacggctctcagtttcggggaaactctcag
cacgatgcacttgaattcctcctctggcttttggacagagttcatgaagatgccaatgaa
agccccaacaacaccacaaacggcagcagcagcaagaccaaagccaacgccaagggaccc
agttcatctgagcatccttccagtcccagttcagtcggcacccagcagccccgggatcga
cacagttttgtccaggaacacttccaggctcagtacaggtcttctttgacgtgccctcat
tgccttaagcagagcaacaccttcgacccgtttttatgtatctccctgcctatcacactg
cgacaaaccaggtcgatgtgtgtgacactggtgttcagtacgaagggtcagagatacctg
cgggtggggctggctgtacctctctttggttccctgtcctgcctcagatcaatggtggcc
caggagggcaacatctccccagaccaggtcatcctatcagagttgtactctacaggtttc
caacgatccttttcagatgatgatgacatgacagtaattgctgatagcgacgttatctac
gcctttcaggctccgcccctccatagtcgaggaggctccacaccacactcagggtatcac
cacagcctcccctcctccccctacacttccaatgcaggacccgacggacagaggttacct
tcttctggcaccctctcctctgaatacctgaaccagggcggctccacaaaggttctcctt
gtcatctgcaacacagcaggatctggccagcaggcggtcaggtttggacctccatttctc
atgcgtgaggacaggagcatctcctgggaccagctgcagcagagcatcctcagcaagctg
tattatctgatgctgaatggatcccaggctcagaatgctggcatgctgttcaagattaga
gtagttggaggatcgtcaaactacagctacctgtccccgcaggacagcaggccactgtac
cacactgctgttgacagagctctgaagttctgcggccccggaggaccaccccatgttaag
gttgtcattgagtgggagaacaagatcaaagaatgtctctttggcagcatccaggaggag
gtggtgaaggatgcagagagtgtgaggaaccagaagcagcagcacctgcagcagcacagc
tgcactttagacgagtgcttccagctgtacaccaaagaagaacagcttgccccggatgac
gcctggaagtgtccccactgtaagcagcttcagcagggcatggtgaagatgagcctctgg
actcttccggacatactgatcctccacctcaagcgctttcgacaggtaggcgagcggagg
aacaagctgtccaccctggtgcgtttccccctcactggtttggacatggccccccatgtg
gtgaagaggactcagagtatgaagaacctgaacttgggggcctggcctcctccttggaag
cagtcctcaggccaacaccaacctgacctgaccctcccccaggacgctctgtacgacctc
tacgctgtgtgtaaccatcatggaggaatgcatgggggacactacactgcctactgtagg
aactcagtggacggacagtggtacagctacgatgacagcagcgtagacatggtgcctgag
gaagaggtttgcaccagaggagcgtacattcttttctaccagagacgcaacctcattcct
ccgtggtcggccagttgctctgtcagaggatccacaagttcatcaatgtcagaccactgg
ctgatacggctgacaggggacagtcagagaggcagtatggtctctcgatcctccaccacc
tgcccatcctccttacctgactcacccgagtctccggtcttctttgaaaacggttcaaaa
gaagaaagagggggtttcgatagcaggccttttatcagaggtcttcagggaaggagtgtg
agcatgagagcacccagcaagaccagggaaacactgagcaaagttttccccctgcgctgg
tccttcggttcaaaggacagacggaaacctgacccagtgcccccggctgtccaagaccct
gcccctgtggagctggtacagtacttggagtctggccggcggccccggtgcacaaaagat
ccaatagcaacgttgatgaacgagccacgcagcgcaagggaagcttctgagggccgggct
tccgctaatgttcgatcttccagtgttggaagtttaagttgtttaaataaggcaggagat
gggctgccgcttgagtctacaaaggtacctgagggccagaggaggccgtcagataagaca
gcaagcttgagacgcagtaaggggagccagccaagagacgacaggacgacaaatatcagc
agtagctctagcagtaacactctcaccaggaggaaagatgacaggaaggaaagctcctcc
aaagcttgccaggatactgagacaaaaaggagttccagtgctggtgttcagtccagctgc
agcactcctagccttcaggatgggaccctgagaagacaaaaaggggacagggctgataca
caaggtgcatacgaaggaaactctaagactaagaaagaagaagtgcctaggaaccatgaa
ggactgctctccttctttaaaggtagtttcctgaagaaggatagggactcaaggaagtca
aaggagggtgaatcaggaagaggagccggtgaggaaggaggcagaaggacgctctctaag
tcgtcgctgtcaaatggagcagcagcagcagcaggaggaggaactgaactggaagtacac
aagtctaatggctcgggccaccggggcgacgaactggcaaacgggaaggtgggacggaca
acggcggatatcaagcgctcccagagctcctccaacatccccatcaaagcggagcagagc
atgcgtaggacagcttccctgcatcgcaacgggatgtctacagccccatcacgcagcctg
gcaacagacaaaccgccgcacggcaccctgcagaggactcgatacagcacaacctcgctt
ggacgcaaaaagacagtcccagagtccagcttctga
DBGET
integrated database retrieval system
