Pseudochaenichthys georgianus (South Georgia icefish): 117446810
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Entry
117446810 CDS
T09629
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117446810 (ppfia4)
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117446810 (ppfia4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
117446810
NCBI-ProteinID:
XP_033939140
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Position
5:complement(13826625..13888059)
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AA seq
1218 aa
AA seq
DB search
MMCEVMPTISEGDSAGPPRGTGGVPNGSDQEANFEQLMVNMLDERDKLLESLRETQETLI
QSQTKLQGALHERDVLQRQINAALPQEFATLTKELNICREQLLEKEEEISELKAERNNTR
LLLEHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERL
RVALERVSSLEGQLTASTQELNTVRQRKDGDSLERTDGSKPTWKRLPNGSIDAHDEGSRV
SELQELLERTNKELVQSREHSATLSGRMADLEAELTNARRELCRSEELSIKQHREQRERE
DMEERITTLEKRYLAAQRETTHIHDLNDKLENELATKDSLHHQSEEKVRQLQEMLEMAEQ
RLAQTMRKAETLPEVEAELAQRVAALSKAEERHGNVEERLRQLESQLEEKNQELGRARQR
EKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNSLIQDLENCQKQLEEFHHT
RERLIGEIEKLRNEIDHLKRRSGAFGDVSHSRSHLGSASDLRFSVVEGQDGHYSTTVIRR
AQKGRMSALRDDPNKVCAVFEQDYPSLRGSVSHLLGSDIEAESDMDDDVSSTLLSPSGQS
DAQTLALMLQEQLDAINEEIRMIQVERESADLRSDEIESRVNSGSMDGLNVTLRPRALPT
SATAQSLASSSSPPTSGHSTPKHHSRNASHHLGIMTLPSDLRKHRRKVASPVEVDKATIK
CETSPPSSPRSLRLETNFAQFTGSLEDGRGKQKKGIKSSIGRLFGKKEKGRMEQTAAVCR
EVQPLPALTDFDMGIGDTMTLGKLGTQAERDRRMKKKHELLEDARKRGLPFAHWDGPTVV
SWLELWVGMPAWYVAACRANVKSGAVMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSL
TSPSAPLTSRTSSGNVWVTHEEMENLASSTKAVSPLSLSELVIVSNHAATQDNEEGSWAQ
VRSLTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRSHLKMVDS
FHRASLQYGIMCLKRLNYDRKELDRRREDSQHEMKDVLVWTNEQVIHWVLSIGLREYNGN
LLESGIHGALLSLDETFDYSSLALILQIPMQNTQARQVLEREFNNLLALGTDRRLEESGD
DKSFRRSPSWRKRFRAREGGVGMGMMAGSMETLPAGFHMPSMSMPPSVNLMPKKQLQSEA
PPPASPRLDPSAVRTYSC
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgaccatcagcgagggagactcggccggtcctcccagaggc
accggcggcgtcccgaacggctcggaccaggaggccaacttcgagcagctgatggtcaac
atgctggacgagagggacaagctgctggagtccctcagggagactcaggagaccctcatc
cagtctcagaccaagctgcagggggcgctgcacgagagggacgtgctccagcggcagatc
aacgccgcgctgcctcaggagtttgccaccctgacgaaggagctgaacatatgccgggag
cagctgcttgagaaggaggaagaaatatctgagctcaaagctgaaaggaacaacaccagg
ctgctgttggagcacctggagtgtctggtgtctcgtcacgaacgcagtctgaggatgaca
gtggtgaagagacaggcacccccaccatctggagtctccagtgaggtggaggtcctcaaa
gctctgaagtcgctgtttgaacaccacaaggctctggatgaaaaggtacgtgaaaggctt
cgggtggctctggagagggtgtcctctctggagggacagctaacagctagcacacaagag
ttaaacacggtgagacaaaggaaggatggtgactcattggagcgaacagatggatccaaa
cctacatggaagagactgcccaacggctccatagacgcccacgatgaaggcagccgggtg
tccgaacttcaggagctgctggagcggaccaacaaggagctggtccagagccgcgagcac
tctgccactctcagcggtcgcatggccgatctcgaggcagagctcacaaatgcacgcaga
gaactgtgccgcagcgaggaactgtcaatcaaacaacatagggaacagagagagagggag
gatatggaggagaggataacaacgctagagaaacgctacctggctgctcagcgggagacc
acacacatccacgacctcaacgacaaactggagaatgaactggccaccaaggactcgctg
caccaccagagcgaggagaaggtccgtcagttgcaggagatgctggagatggcagagcag
aggctggctcagaccatgaggaaggctgagacgctgccagaggtggaagctgaactggca
caacgagtggctgcactttccaaggctgaggagcgccatggcaacgtggaggagcggctc
agacagctggagtcacaactggaggagaagaaccaagaactgggaagggctcgtcagaga
gagaagatgaatgaggagcacaacaagcgcctgtctgacaccgtggatcgtctgctcacc
gagtccaacgagagactgcagctccatttgaaagaacgcatggctgccctggaggacaag
aactccctcattcaggatcttgagaactgccagaaacagcttgaagaattccaccacacc
cgggagcggctgattggagagattgagaagttgagaaatgaaatcgaccacttgaaacgc
cgcagtggagcgtttggagatgtgtctcactctcggtctcaccttggaagtgccagcgac
cttcgcttctctgtggtggagggccaagatggccactacagcacaactgtgatcaggagg
gctcagaagggcagaatgtcagcgctgagagacgacccaaacaaggtgtgcgctgtgttt
gaacaggactacccgtctctccgcggcagcgtcagccacctcctcggcagcgacatcgag
gcagagtctgacatggatgatgacgtcagctccaccctgctttcccccagcgggcaatct
gacgctcagactctggctctcatgctgcaggagcagctcgatgctatcaatgaagagata
aggatgatccaggtggagagggagtcagcagacctgcgctctgacgagattgagtctcgt
gtgaacagtggcagcatggacggcctcaacgtgacgctgcgaccccgggcgctgcccacc
tccgccaccgcccagtccctggcatcctcctcctccccccccaccagtggccactccaca
cctaaacaccactcgcgcaacgccagccaccacctaggcatcatgactctgccaagcgac
ttgaggaaacaccgcaggaaagtagcgtctccggttgaagtggacaaagctactatcaag
tgtgagacatcgcccccctcgtccccccgaagtttacggctagaaaccaatttcgcccag
ttcaccggcagtctagaggacggcagaggcaagcagaagaaaggcatcaagtcatctatt
ggccgactgtttgggaagaaggagaagggtcgaatggagcagactgctgctgtgtgcagg
gaggttcagcctctaccggccttaacagactttgacatgggcatcggtgacactatgact
ttgggaaaactgggcacgcaggctgagagggatcgcaggatgaagaaaaaacacgagctt
ctggaagacgccaggaaaagaggcctgccatttgctcattgggacggccctactgtcgtc
tcctggctagagctgtgggtgggaatgccagcgtggtatgtggcagcgtgtcgtgccaac
gtgaagagcggagccgtgatgtcagctctgtctgacacagagattcagagggagattggc
atcagcaaccctctgcaccgactcaaactgcgcttggccatccaggaaatggtttccctc
accagcccctctgcaccccttacctccagaacgtcctccggaaatgtgtgggtgactcat
gaagagatggagaacctggcttcctccactaaagcggtatcccctctctctctctctgaa
cttgttattgtctctaaccatgctgccactcaggacaatgaggagggcagctgggcacag
gtgaggtcgctgactctggcgtatggcgacatgaatcatgagtggatagggaatgaatgg
ctgcccagcctcggcctgcctcagtaccgctcctacttcatggagtgtctggttgacgca
cgcatgctggaccacctgaccaagaaggaccttaggagccacctcaagatggtggacagc
ttccatagggctagtctgcagtatgggattatgtgcttgaagagactcaattatgacagg
aaagaactggatcgccggagagaggacagccaacacgagatgaaagatgtgttggtgtgg
accaatgagcaggtgatccattgggtcctgtccattggtttgagggagtataacggcaac
cttttggagagcggcatccacggagctctcctctctctggacgagacctttgactacagc
agcctcgcactcatcctgcagatccctatgcagaacacacaggcacggcaggtactggag
agggagttcaacaacctgttagccttggggaccgaccgtcgactagaggagagcggagat
gacaagtcttttcgacgctctccatcgtggcgcaagaggtttcgggcgcgtgagggaggg
gtggggatgggcatgatggcgggctccatggaaacgctgcctgctggcttccacatgccg
tcgatgtccatgccgccctctgtgaacttgatgcccaagaaacagctccagtctgaagct
ccgccaccggcctcaccgagactcgacccctcggccgtgcggacctactcatgctaa
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