Pseudochaenichthys georgianus (South Georgia icefish): 117446811
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Entry
117446811 CDS
T09629
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117446811
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117446811
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117446811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117446811
NCBI-ProteinID:
XP_033939152
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All DBs
Position
1:complement(31418122..31425798)
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AA seq
427 aa
AA seq
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MAETDVDNELLDYEEDEEPQGVPESGTPATKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGLAIKKDEEVLKKNCPHIVVGTPGRTLALIR
NKTLNVKNIKHFVLDECDRMLEQLDMRRDVQEIFRVTPHEKQVMMFSATLSKDIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKIKDSEKNRKLFDLLDVLEFNQVVIFVKSVHRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEADAKTLNDVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccgagacagacgttgataatgaacttctggactatgaggaggacgaggagccccag
ggagttcccgagagtgggaccccagcaaccaagaaggaagtgaaggggtcatacgtatcc
attcacagctcagggttcagagactttctccttaaacccgagcttctccgtgcaattgtt
gactgtggttttgagcatccctcagaagtccaacatgagtgtattccacaagctatcctg
ggcatggacatcctgtgtcaggccaagtctggtatgggaaagacagcagtgtttgtcctt
gccaccctgcaacagatagaacctgtagatggccaggtatctgtccttgtaatgtgccac
acgcgagaattggccttccagatcagcaaagagtacgagcgcttctccaaatacatgccc
actgtcaaggtgtcggtgttcttcggtggcctggctatcaagaaagacgaggaagtattg
aagaagaactgccctcacattgtcgtaggaaccccaggacgtaccctggccctcatccgc
aacaagaccctcaacgtgaagaacatcaaacactttgtgctggacgagtgcgataggatg
ctggagcagcttgacatgagacgtgatgtccaggaaatcttcagggtgacaccccatgag
aaacaggttatgatgttcagtgcaacgctaagcaaagacatccgtcccgtctgccgcaag
ttcatgcaggatcccatggaagtgtttgtggatgacgagaccaagctgacactccacggc
ttacaacagtattactgcaagatcaaggatagcgagaagaaccgaaagctcttcgacctg
ctcgatgtactcgagttcaaccaggtggtgatctttgttaagtcagtgcaccgctgtgtg
gctctgtcacagctgctggtggagcagaatttccccgccatcgccatccacaggggcatg
gcacaggaggagcggttatcccggtaccagcagtttaaagacttccagcgacgaatcctg
gttgccaccaacctgtttggtcgaggcatggacatcgagcgagtcaacattgtcttcaac
tacgacatgccagaggattctgacacataccttcacagagtggcccgtgccggcaggttt
ggcaccaaaggcctggccgtcacctttgtgtctgacgaggctgacgctaagaccctgaac
gacgtccaggaccgcttcgaagtcaacgtagcagagctaccagaggagattgatatctcc
tcctacattgaacagtccagatga
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