Pseudochaenichthys georgianus (South Georgia icefish): 117446814
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Entry
117446814 CDS
T09629
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00510
N-Glycan biosynthesis
pgeo00513
Various types of N-glycan biosynthesis
pgeo01100
Metabolic pathways
pgeo04141
Protein processing in endoplasmic reticulum
Module
pgeo_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
117446814 (rpn2)
00513 Various types of N-glycan biosynthesis
117446814 (rpn2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117446814 (rpn2)
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GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Rad52_Rad22
DUF5859
CarboxypepD_reg
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
117446814
NCBI-ProteinID:
XP_033939158
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Position
5:3562429..3578882
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AA seq
632 aa
AA seq
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MDRSRLFGLFSLLSVALSGSQALTPAHYLSLSDVARLQKLLSQQFTDLDSAYYSVVGLSK
LGASVPDHEGVCQFIKSQLDPTSVDSLFFAAESSQAISGCEIPVSNETRDILLAAVSEDS
SMAQIHRAVSALSSLGLPLTSQEVVGALTGRINKEDNVMAITSALLTAARLSKDAELGGI
LEEIEDLTARLDDLGGIYLQFEEGLEATAMFVAAAYSLSDHVDMEPPLKEDQVIQLVNSI
FGKKSWDSLSEAFSVASAAAALSNNRFHVPVIVSARGPATVSHSQPTLQLLVTDIMSQPL
TAANVLVESAHAVASKSIILSQTAFTLNNGVFELNFMSAQPASGYYQFTVAVTGDSRLVA
NHVELKVKVSTEVSVTSMDLSVVDKDQSIGTKTVRVDYPSKAKVSFTADSHQNFAMAFQL
VDVNTGVELTPHQTFVRLQNQKTGQEVVFVAEPDSKKLYKFELDMAERKSEFDSMSGTYS
LHLIVGDATLENPILWNVADVVLKFLDEEAPVAAQPKTLYVPKPEIQHMFREPEKKPPTM
VSNAFTALILSPLLLLLLLWFKLGANVSNFSCTPSTVMFHVGHAAIMGLMYLYWTHLNMF
QTLKYLAIIGTLTFLAGNRMLAQKAVKRLENK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggaccggtctaggctgttcggtttgttctccctcctgagtgtggctctttctggatcc
caggcgctcaccccggctcactacctctccctgtccgatgtggcccgccttcagaagctc
ctgagccaacagttcaccgacctggactccgcgtactactctgttgttggtctgagcaag
ctcggagcatccgtccctgatcatgagggagtctgccagttcatcaagtcccagctggac
cccactagtgtcgactcgctcttctttgccgctgagtccagtcaagccatttccggatgt
gagatccccgtgtccaatgagacgcgggacatcctgctggcggccgtcagtgaggactcc
tccatggctcagatccacagagcggtgagcgccctcagctctctgggccttcctctgacc
tcacaggaagtagtgggagctctgaccggccgcatcaacaaggaggacaacgtcatggca
atcacttcggctctgctgacggcggcccgtctgtccaaggacgcagagctcggaggaatc
ctggaggaaatcgaggatctgaccgctcgcttggatgatctcggaggcatctacctgcag
ttcgaagagggactcgaggcgaccgccatgtttgtggccgctgcttattccctctctgat
cacgtggacatggagcctccgctgaaggaggaccaggtgatccagctggtgaactccatc
ttcggtaagaagtcctgggactctctctccgaggcgttcagcgtggccagcgccgccgcc
gctctctccaacaaccgcttccacgtgccggtcatcgtcagcgctcggggcccggccacc
gtgtcccacagccagcccaccctgcagctcctcgtcacggacatcatgtctcagcctctg
accgccgccaacgtgctggtggagtctgcgcacgctgtggcctccaagagcatcatcctc
agccagactgctttcacactcaacaacggcgtctttgaactgaacttcatgtccgcccag
ccagccagtggctattaccagttcactgtcgcagtgaccggggacagccggcttgtggcc
aatcatgttgagctcaaagtgaaggtgtccaccgaggtgtccgtcaccagcatggacctc
tctgtggtggataaggaccagagcatcggcacgaagaccgtcagggtggactatccttcc
aaagccaaggtctccttcaccgcagacagccaccagaactttgccatggccttccagctg
gtggacgtgaacactggagtggagctgaccccccaccagacttttgtccgcctgcaaaac
cagaagacgggtcaggaggtcgtgttcgtggccgagcccgacagcaagaaactgtacaag
ttcgagttggacatggcagagcgcaaatctgagttcgactccatgtccggaacctactcc
ctccacctcatcgtcggggacgcgaccctggagaaccccatcctgtggaacgtggctgac
gttgttctgaagtttctggacgaggaagctccggtggccgctcagcccaaaacgctctat
gtgcccaaaccggagatccagcatatgttcagagaaccagagaagaagcctcccacgatg
gtgtccaacgccttcacggctctcatcctgtctcccctcctgctgctgctgctcctgtgg
tttaaactcggagccaacgtctccaacttcagctgcacccccagcaccgtcatgttccac
gtgggacacgcagccatcatgggcctgatgtacttgtactggactcacctcaacatgttc
cagactctgaagtacctggccattatcggcacccttaccttcctggccgggaaccgcatg
ctggcacagaaagcagtgaaaagactcgaaaacaaataa
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