Pseudochaenichthys georgianus (South Georgia icefish): 117446923
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Entry
117446923 CDS
T09629
Symbol
cldn19
Name
(RefSeq) claudin-19 isoform X1
KO
K06087
claudin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03272
Virion - Hepatitis viruses
pgeo04382
Cornified envelope formation
pgeo04514
Cell adhesion molecule (CAM) interaction
pgeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117446923 (cldn19)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117446923 (cldn19)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117446923 (cldn19)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117446923 (cldn19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117446923 (cldn19)
04147 Exosome [BR:
pgeo04147
]
117446923 (cldn19)
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117446923 (cldn19)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117446923 (cldn19)
Exosomal proteins of colorectal cancer cells
117446923 (cldn19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF8123
Amastin
Motif
Other DBs
NCBI-GeneID:
117446923
NCBI-ProteinID:
XP_033939334
LinkDB
All DBs
Position
5:complement(3490929..3506485)
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AA seq
222 aa
AA seq
DB search
MANSGLQLLGYFLALGGWIGIISTIALPQWKQSSYAGDAIITAVGLYEGLWMSCASQSTG
QVQCKIFDSMLSLDIHIQTCRALMVVSVLLGFMGMIISVVGMKCTKVGDNNPTTKSRIAV
TGGALFLLAGLCTLVSVSWYATQVSYQFFNPNTPPNARYEFGSALFVGWAAASLTVLGGG
LLCCSCSKEDMRGQQYYRQSQPSTTREPNVKSTPPEKREQYL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggccaactcagggctccagctgttgggttatttcctggcgttgggcggatggatcggc
attatctccaccatcgccttgccccagtggaagcagtcttcgtacgccggcgatgccatc
atcacggccgtgggtctgtacgaggggctgtggatgagctgcgcctcgcagagtacggga
caggtgcagtgcaagatctttgactccatgctctcgctggacatccacatccagacatgt
cgggccctaatggtggtgtcggtgctgctgggcttcatgggcatgatcatcagcgtggtg
ggcatgaagtgcacgaaagtgggagataacaacccgaccaccaaatcccgcatcgctgtg
accggaggagctctcttcctgctcgcaggtctttgcaccctggtgtctgtgtcctggtac
gccactcaggtgtcctatcagttcttcaacccaaatacaccgcccaacgcaaggtatgag
ttcggctcggccctgttcgtgggctgggccgcggccagtctgacggtgctgggcggcggc
ctgctgtgctgctcctgctctaaagaggacatgcgagggcagcagtattaccgccaatca
cagccctccacaaccagggaaccaaatgttaaaagtaccccaccagagaaaagggagcag
tacttgtag
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