Pseudochaenichthys georgianus (South Georgia icefish): 117446948
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Entry
117446948 CDS
T09629
Symbol
ift56
Name
(RefSeq) intraflagellar transport protein 56
KO
K19685
intraflagellar transport protein 56
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117446948 (ift56)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117446948 (ift56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_16
TPR_2
TPR_8
TPR_6
TPR_9
Coatomer_E
TPR_7
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
117446948
NCBI-ProteinID:
XP_033939373
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All DBs
Position
1:31706076..31715268
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AA seq
557 aa
AA seq
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MILSRVKPAVGGETAVSISEKKKKNKTKVPSLEEYLQQRDYLGAFTLLEFQRSIGEKEEH
ADLWIGYCAFHLGDYKRAMEEYKALTMKPDCAEDVWVFLACVLFFLGLYKEAQDAASKAP
VSPLQNRLLFHLAHKFNDEKSLMSFHQNLEDVTEDQLSLASIHYMRSHYQEAIDIYKRLL
LQNREFLALKVYVALCYYKLDYYDVSQEVLAVYLQSVPDSTIALNLKACNHFRLYNGKAA
EAELKNLIDISSCSFEFAKELIRHNLVVFRGGEGALQVLPPLIDVIPEARLNLVIYYLRQ
DDVQEAYNLIQDLVPNTTQEYILKGVVNAALGQEIGSRDHLKFAQQFFQLVGGSASECDT
IPGRQCMASCFFLLRLFEDVLIYLNSVKGYFYNDDTFNFNYAQAKAALGNYKEAEEIFLL
IQSEKIKNDYVYLSWLARCYIMNQRGRLAWELYLKMGTSSDSFSLLQLIANDCYKMGQFY
YAAKAFDALEKLDPESNYWEGKRGACVGIFQLILANKESKETLKEVLSLLRNSGNPQVEY
IIRALRKWAKDNRVLLS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatcctctctcgcgtgaagccagccgtgggaggagagacggcagtgagcatcagcgag
aaaaagaagaaaaacaagacaaaagttccgtcattggaggaatacctgcaacagagagac
taccttggggcttttaccctgttagagtttcagagaagtattggcgagaaagaagagcat
gcagacctctggattggctactgtgccttccacctgggcgattacaagagagctatggag
gagtacaaagctcttaccatgaagcctgattgtgctgaggatgtgtgggtctttctggcc
tgtgtactgttttttctgggtctctataaagaggctcaggacgctgcatccaaggctcca
gtgtcccccctccaaaaccgactactcttccacctggctcacaagtttaacgatgagaag
agtctgatgagtttccatcagaatctggaggacgtgacggaggaccagctgagcctggcg
tccatccactacatgcgctcccactaccaggaggctatagacatctacaaacgccttctc
ctgcagaacagagagttcctggccctgaaagtgtacgtggctctgtgttactacaagctg
gattactacgacgtgtctcaggaggtgctggctgtgtacctgcagagcgtgccggactcc
actattgccctgaacctcaaggcctgcaaccacttcagactttacaatggcaaggcagcc
gaggctgagttgaagaacctaatcgacatctcctcctgctcctttgagtttgctaaggag
cttatccgacacaacctggtggtgttccgtggtggggagggggcgttgcaggtgctgcct
cctctgatcgatgtgatccccgaggccagactcaacctggtcatctactatctcagacaa
gatgatgtgcaggaagcctacaacctcatccaagatttggttcccaacacaactcaggag
tacattctgaaaggagtcgtcaatgcagctttgggacaagaaattggatcaagggatcac
ctgaaatttgctcagcagttcttccagctggtcggaggctcggccagcgaatgcgacact
attcctggcagacagtgcatggcgtcctgcttcttcctcttaagactgtttgaagatgtc
ctcatatatctcaactcagtcaagggttatttctataacgatgatacgttcaacttcaac
tatgctcaggctaaagcagcccttggcaactacaaagaagcagaagagatttttctactg
attcagagtgaaaagatcaagaatgactatgtttacctcagctggctggctagatgctac
atcatgaaccagaggggccggcttgcctgggagctctatctgaagatgggcacttcctcc
gattccttcagtctgctgcagcttattgccaacgactgctacaagatgggccagttctac
tatgcagctaaagcgtttgatgctctggagaaactggacccagaatccaactactgggag
ggcaagagaggcgcatgtgtcggcatcttccagctcatactggccaacaaggagtctaag
gagacacttaaagaggtgttgtctctgctgcgaaattcaggaaacccccaggttgaatat
ataattcgagctctgaggaaatgggccaaagacaacagagtccttctctcatga
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