Pseudochaenichthys georgianus (South Georgia icefish): 117446962
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Entry
117446962 CDS
T09629
Symbol
snta1
Name
(RefSeq) alpha-1-syntrophin
KO
K24063
alpha-syntrophin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117446962 (snta1)
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117446962
NCBI-ProteinID:
XP_033939388
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Position
5:complement(25719888..25751978)
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AA seq
487 aa
AA seq
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MAAAMKAQKTGLLELRLTVDRWIRVLATLTEDTLTLNPGEGAEEPAKPALNPAGAINGDP
PNLSSSPVPETITNVKRTVRVTKQDVGGLGISIKGGKENKMPILISKIFKGLAADQTEAL
YVGDAILSVNSYDLREATHDEAVQALKKTGKEVILEVKYIKEMSAFFKNSGSPGAALPWD
SPPSTPQRGTELSPAEGKEPRSIPLKMCQVLRRQCPPDTEHRYFEVISANRKNSVFLRAI
DPAMAQSWFNAIQTGTANLLPRLKGEMKSMQLGIDVKHLGWITEQVTQGPEKPVLAMLTD
RDLLLYPSLPESKESLSSPIKSHPLIATRLVHSGPGKSSPLQDYDLSFGLRTGTKQGVDT
HVFRVDSAKELSTWTHLLVEGCHNAAELIKEVTTACSWNGKECNLGVHIDEGFTLFTEEM
GVRKSILLQQPFERLRMSSDDGVRMMFLDFGGPEAEIQLDLHSCPKTIVFIIHSFLSAKV
KRLGLLA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcgatgaaggcgcagaaaacgggactgctggaacttcgactgaccgtggac
cgctggatccgggtgttggccactcttaccgaggacacgctcacattaaaccccggggag
ggtgccgaggagcccgcaaagccagccctgaaccccgccggtgctatcaacggagacccc
ccgaacctaagctcgtccccggtcccggaaaccatcaccaacgtgaagcgcaccgtgcga
gttaccaagcaagatgttggaggtctgggaatcagtatcaaaggtgggaaggagaacaag
atgccaatcctcatctccaagattttcaagggcctggctgctgaccagacggaggccctt
tatgttggggacgccatattgtctgtcaatagctacgacttaagggaggccacacatgat
gaggctgtgcaagcactgaaaaaaactggcaaagaagtcatcctcgaagtgaagtacatc
aaggagatgtcggccttctttaaaaactcggggtcccccggggccgccctcccctgggac
tctcccccctccacccctcagaggggcactgaactctcacctgctgaggggaaggagccc
cgcagcatcccgctaaagatgtgccaggtattacggagacagtgccccccagacacagaa
cacaggtatttcgaggtgatttcagccaacagaaagaactccgtgttcctgcgggctata
gacccagccatggctcagtcctggttcaatgccatccagaccggcactgccaaccttcta
ccccgattgaagggggagatgaagagcatgcaacttggcattgatgtcaaacatctgggt
tggattacagagcaggtgacccagggtccagagaagccggtgctggccatgttgacagac
agagacctgctcctgtatccctccctgcctgagagcaaagagagcctcagcagccccatc
aagagtcacccgctcattgctaccagactggtccactccggcccaggaaaaagttctcct
ctccaggactatgacctctcatttggcctgcgcacaggcacaaagcaaggcgtggacacc
catgtgttcagggtggattctgccaaagagctgtccacctggactcatctgttggtggag
ggctgccataatgctgctgagctcatcaaggaggtcaccacggcctgcagttggaatggg
aaggagtgtaacctgggagtccacattgatgagggcttcacactattcaccgaagagatg
ggtgtcaggaaaagtattctgctgcagcagcccttcgagcgcctcagaatgtcatcagat
gatggagttcgcatgatgttcctcgactttggaggtcctgaggccgagattcaactggac
ctccactcttgccccaagaccatcgtcttcatcatccactctttcctgtctgctaaggtc
aagagacttggcctcctggcatga
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