Pseudochaenichthys georgianus (South Georgia icefish): 117447021
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Entry
117447021 CDS
T09629
Name
(RefSeq) contactin-4 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117447021
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
117447021
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
Contactins
117447021
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
Others
117447021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
V-set_CD47
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
117447021
NCBI-ProteinID:
XP_033939480
LinkDB
All DBs
Position
5:complement(4210392..4265038)
Genome browser
AA seq
1023 aa
AA seq
DB search
MKMLLPWELLILLLLKECLAENTRHGPVFTQEPSDSIFPLSIDDKQVFINCNARGNPTPH
YRWKMDGRELNTESDPNFSLVEGSLLISDPRVMDHAGVYQCIATNTFGTVVSREAKVQFA
FLHNFSMKSRNTVSVREGQAVVLLCGPPPHYGEIKYSWVFNGQRSFLQQDARRFISQRTG
NLYVAKVEASDAGNYTCAVRNMMTNATVLSSPTPVVVRRDVMGEYEPKIEVQFPDTLHIS
KGSSVKLECFALGNPVPSISWRKADGNPLPGKIKINHSSGVLEIPYFRPEDAGVYECVAE
NSRGRNVARGQLLFQNVEHLHWVQTLRDAHMAIDANLLWECKASGKPKPAYRWLKNGQPL
TPEGRIHVEDGRLTISSITLLDSGMFQCVAETEHGAAYASAELKVVASPPDFTRRPVKKS
TVMQRGGEVVLECRPHASPRAAISWWRGGELLQGGKRQTITEDGTLRITNISKSDGGRYT
CLAKNHFGTSSSTGTLVVKDPTKIIVPPLSLDASVGQSLVLPCEVSSDSSLSPIFKWFFN
GKAIDFSRQEHFEMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGPPG
APESLVVTDITDTTVQLSWGSGPDNHSPVTRYIVQARTPFSIGWQTVRTVPESVPGQMMR
ATVRDLNPWVDYEFRVVAINSVGVGEPSTPSKQTRTKAAVPKVAPVSVSGGGGARGELVI
TWEPVSEEQQSGEDFGYVVAFRPLGSSTWIQTVLASPDASRYIYRNESIAPLSQFEVKVG
VYNGMGEGPFSRILTVLSAEEEPSEAPSGVWARAVSASEIEVYWQPIAPGSSSEKIIAYE
VLFWEEGSEQSEAETARVIDTKALLSGLKGSSAYQIAVRAQNSAGLGPCSRALNITTKKP
PPSQPPGNIEWNLSNSKIFLNWEHVKAMENESEVTGYKVVYRQNWHGRISVLETNKTSVE
LHIPSGEDYLIEIKALTEGGDGTSSGPIRIPKMSSLNSKGSVCQVPMKICSCMMFPVFVM
FIM
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttgttgccatgggaactgttaatccttctgttactcaaagagtgcctggct
gagaatacacgccatggtcctgtcttcacccaggagccgagtgacagcattttccccctg
agcattgacgataagcaggtgttcattaattgtaacgcaagaggaaacccaactcctcat
tataggtggaaaatggatgggagagagctaaacacggagtcggatccgaacttcagcctg
gtggaggggagcctgctgatcagtgacccccgtgtcatggaccatgcaggagtgtatcag
tgcatcgccaccaacacattcgggactgtcgtcagcagggaggcaaaggtccagtttgca
tttctgcacaactttagcatgaagtccaggaacacggtgtcggtgagagagggtcaagcc
gtggttcttctgtgcgggcctccaccccattacggagagataaaatattcctgggttttc
aacggtcagcggagcttcctgcaacaggacgcccgtcgctttatctctcagaggacaggc
aacttgtacgtggccaaagttgaagcctccgacgcggggaactacacgtgtgcggtgaga
aacatgatgaccaacgccacagtgctcagctctccaacccctgtggtggtgcggagagac
gtgatgggcgaatacgagccaaaaattgaggtgcagtttcccgacacccttcacatctcg
aaaggatcatcagtgaaactggaatgcttcgccttaggaaacccggtgccttccatctcc
tggagaaaagctgatggaaatccactccctggaaagattaaaatcaaccactccagtggg
gttctggaaatcccatattttcgcccagaggatgccggcgtgtacgagtgtgttgccgaa
aacagcagaggacgaaatgtagccagagggcagcttctattccagaatgttgagcatctg
cactgggtccagacactgagagatgctcatatggcaatagatgctaatctgctgtgggaa
tgtaaagccagtgggaagccgaagccggcgtacagatggctgaagaacggtcagccgctg
acaccagaggggaggatccatgtggaagatggcaggctgaccatatccagcatcactctg
ttggactcggggatgtttcagtgtgtggcagaaactgagcacggagctgcctacgccagc
gctgagctcaaggttgttgcctccccaccggacttcacccgacggcccgtgaagaagtca
acagtgatgcagcgggggggcgaggtggtgctggagtgtcgcccccacgcttcccccagg
gccgcaatctcctggtggagagggggggaactcctccaggggggcaagagacagactatc
acggaggatgggactctacgtatcaccaacatctccaaatctgacggaggcaggtacaca
tgcttggccaaaaaccactttggaacatccagcagcacaggaacgctggtggtaaaagat
ccaacaaagattatagtcccacccttgagtttggatgccagcgttggacagagcctcgtg
ctgccatgcgaggtgtccagtgactcgtccctgagtcccatcttcaagtggttcttcaac
gggaaagcaatagatttcagcaggcaggagcactttgagatgataggagggggatttgca
ggtgacctgatggtgaggaacattcagctaaagcattctgggaagtacgtgtgtatggtg
cacactgaagttgacactgtctcagcagcagcagacttaattgtcagaggaccccctggt
gccccggagagcctggtggtgacggacatcactgacaccactgtgcagctgtcctggggc
tcgggacctgacaaccacagtcctgtcaccaggtacatagtgcaggccaggacccccttc
tccataggctggcagactgtgagaacagttcctgagtctgtgcctggacagatgatgcgt
gcaacagtgagagacttgaacccctgggtggattatgaattcagggtggttgcaatcaac
agtgttggtgttggagaacccagcacgccttcaaagcaaacccgaaccaaagcagcagtt
cccaaggttgcaccagttagtgtgagtggtggcggaggagctcgaggagaacttgtcatc
acgtgggagccggtttcagaggaacagcagagcggagaggactttggctacgttgtggct
ttccgcccacttggcagcagcacctggatccagacggtgctggcgtcgcctgatgcatcg
agatatatatacagaaacgaaagcatcgctcctctgtcccagtttgaagtgaaagtggga
gtctacaacggcatgggggaggggccgttcagccgcatcctgaccgttttatccgcagag
gaagagccctccgaggcgccatccggagtatgggcccgcgctgtgtcagcgtctgagatc
gaggtgtactggcagccgattgcccccgggtccagcagcgagaagatcattgcatatgag
gtactcttctgggaggaagggtctgagcagagtgaagcggagacagcgagggttatcgac
accaaggctctgctctccggcttgaagggcagctcagcctatcagatcgcagtcagagcc
cagaacagcgccggcctcggaccctgcagccgcgctctcaacatcaccaccaagaaacca
cctccaagtcagcctccggggaatattgagtggaacctgagcaactctaagatctttctg
aattgggaacatgtcaaagcgatggagaatgagtctgaggtgacgggatacaaggtggtg
tatcgtcagaactggcacggcaggatttctgtactggaaaccaataagaccagtgtggag
ctccacatcccctccggagaggactacctcatcgagatcaaagctctgactgaagggggc
gatggcaccagcagcgggcccatccgcataccaaagatgtccagtctgaactcaaaaggg
tccgtgtgtcaagttccgatgaagatttgcagctgtatgatgtttcctgtatttgtaatg
ttcatcatgtag
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integrated database retrieval system
