Pseudochaenichthys georgianus (South Georgia icefish): 117447076
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Entry
117447076 CDS
T09629
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117447076
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
117447076
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF5365
YabA
Motif
Other DBs
NCBI-GeneID:
117447076
NCBI-ProteinID:
XP_033939560
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Position
5:complement(22456729..22461133)
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AA seq
424 aa
AA seq
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MERIPSAQPPPLSKHQADLSDMQGMDFPMYVYKPRRGMKRGEESKETYKLPHRLIEKKRR
DRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVRALTSLLEQQQQKIHALQNGM
QIEHPSINQEKSEEMFRSGFHMCAKEMLQFLGNHETDEDLTPSHVINHLHKVAAEVLQGP
VRPRTPLSPQPEETPAYHQHQLHKEMPTSSPPKPSEGYGRNCVPVIQRAYAPMSSEQSGS
DTDTDSGYGGELEKRPQGRPDVYGQESQLKRGLGGTQSSGIKQEDEEPQHKRPRVESSED
ELLSGGESSTSSSSCSYGSYMNVSPNRQPPPHPLCMPFYLIPPSAAAYLPMLEKCWYPGA
VPMLYPGMGGSASSMTSERPSPPQFVLSQRGGSPAPAISQTPMDSPALLQALKQVPPINL
ETKD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaattcccagcgcacagcctcctcctctgtccaaacaccaggctgatctgtcg
gacatgcaagggatggatttcccgatgtatgtttataaacccaggcgaggaatgaagaga
ggagaggagagcaaggaaacctacaagctgcctcacagacttattgagaagaaaaggcgt
gaccggataaacgagtgcatcgctcagttgaaagatttattaccagagcacctgaaactc
acgactctgggccatctggagaaagctgtggttttagagcttacactgaagcatgtgaga
gccctcacctctcttctggagcaacagcagcagaagatccacgctctgcagaacggcatg
caaattgagcacccgtctatcaaccaggagaagtcagaggagatgttccgctctggtttc
cacatgtgtgccaaggagatgcttcagtttcttggcaatcatgagacggatgaagacctc
acgccatcccatgtcatcaatcaccttcacaaggtagccgcagaggtgctgcaaggtccg
gtccgaccccgcactcctctcagccctcaacccgaggagacccctgcataccaccagcac
caactgcacaaagagatgcccaccagctcaccccctaagcccagcgagggctatgggagg
aactgtgtgcctgtcatccagcgggcgtacgctccaatgagcagtgagcagagtggcagt
gatacggatacagacagcggctatgggggagagctggagaagaggccacagggacggcca
gatgtatacggtcaggagagccagctgaagcgaggcctgggcgggacgcagagctccggc
ataaagcaggaggacgaggagccgcagcacaaacgaccccgggtggagtcgtctgaggat
gagctgctctcgggtggagaatcatccacatcatcgtcctcttgcagttacggcagttac
atgaacgtgtcccctaaccgtcagcctcctcctcaccccctctgcatgcctttctacctc
atccccccttctgctgcagcctacctgccaatgctggagaaatgctggtaccccggggct
gtgcccatgctctaccctggcatgggaggctctgcatcgtctatgacaagtgaaagacca
tctccacctcagtttgtgttgtctcaaaggggaggttctccagccccagccatatctcag
acccccatggactcccctgccctccttcaggcactaaagcaggtaccacccatcaacctg
gaaaccaaagactga
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