Pseudochaenichthys georgianus (South Georgia icefish): 117447124
Help
Entry
117447124 CDS
T09629
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pgeo00535
]
117447124 (optc)
Proteoglycans [BR:
pgeo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
117447124 (optc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
117447124
NCBI-ProteinID:
XP_033939640
LinkDB
All DBs
Position
5:43235890..43249295
Genome browser
AA seq
322 aa
AA seq
DB search
MSLMMALVLAVVFMGPSPNMAAPAGVTDDEAFDLDNYSLNSEMDWENLDVNIYGDSYDYD
DLDQEIEVGTVAPDPPSAASLPTAEYHEEELTLPPAPVTLDFKGPGLFGPDTGLGMPTCL
LCVCIGGSVYCDDTGLDQIPLLPKDTTHFYGRFNNIRHVKNTDFNYLNQLQSIDLTGNQI
SGMDEDVFLSLPQLHQLLLADNNLQSMPELPITMKYIDLRNNRLISNGVHSEGFKDMSQL
EFLYLSDNKLDYIPVPLPLGLRVLHLQNNNIQTLYEDSFCNSHDRHFIRRNLEDIRLDGN
PLNIQLFPQAYVCLPRLPVGSH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgatgatggcacttgtcttggccgtggtcttcatgggcccctcccctaacatg
gcagcccctgcaggtgtgacggatgatgaagcttttgaccttgacaactacagcctgaac
agtgagatggactgggagaacctagacgtcaacatctacggagacagttatgattatgat
gacttggaccaagagattgaggtgggcaccgtagctccagaccccccctctgcagcaagc
ctgcccacagctgagtaccatgaggaggagctgaccctgcccccagctcccgtcactctg
gacttcaagggaccgggtctctttggccctgatactggccttggtatgcccacctgcttg
ctgtgtgtgtgtattggtgggagtgtgtactgtgatgacacaggcctggatcagatccca
ctccttcctaaagacaccacccatttttatggccgcttcaacaacattcgacatgtcaag
aacacagactttaactacctcaatcaactccagtccattgatctgacagggaaccagatt
tcagggatggatgaggatgtgtttctgtctctgccgcagcttcaccagttgctgctggct
gataacaacctgcagagcatgcctgagctgccaatcaccatgaaatacatcgatctacgc
aacaacaggctgatcagtaatggggtacattctgaggggttcaaggacatgagccagctg
gagttcctctatctgtctgataataaactggattacattcctgtgccactaccactgggt
ctgagagttttacacctgcagaataacaacatccagaccctgtacgaggactccttctgt
aacagccatgatcgccacttcatccgccgtaacctggaggatatccgcctggacggcaac
cccctaaacatccagctatttccccaggcctacgtctgcctgccccgcctgcctgtgggg
agccactga
DBGET
integrated database retrieval system
