Pseudochaenichthys georgianus (South Georgia icefish): 117447200
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Entry
117447200 CDS
T09629
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117447200 (ap5b1)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117447200 (ap5b1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
117447200
NCBI-ProteinID:
XP_033939765
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All DBs
Position
5:complement(3555910..3561856)
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AA seq
930 aa
AA seq
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MSDIWTQRILSFSRSPSRFLSGTTAEGFLAELLRELRDDRATYSLKVLLLSPLCESPSLL
CLSDLLGEETALELMSIFNQCPPKSVQFRCHLLLALTSVLVCTSCVNNRSRASQDFLDLL
LQISQDSNDLHGDVALRATACDCLREMEACSPGLLSQRLELLGGLRQRETSRLHQAYAGL
HTLVLRNAVYQLTQETGAGAEHLKALLGGNTWEAELDLMNGKDDSAVLSSLIRGPMGSVP
TLQTGPDCKELRAVLSSLLEESYLLTPLSQAALLHRLTEVVAMVPGVSPAVFRAQLLRLL
GTSEVCLFHSTLLMKSAFTDSLFSAEDEAFLLQRLVVLSQHPLLSPPEKLFYIDCILSFP
ENRPIGCGDDALPVLLTPRLASVLVPTVFNDSATLLARLHLLCLVYLEEEDEEEEEGRGL
GYLYDHLTSLLRIVDNGGSREIVVTFFRAAFLFLSYFFPVERFSHSLMEELCSLYLRHTH
LAPHFINLADQVQEQLSESNWATEFLKALQGAITDAELTPKDLSWHLKMLARVAEEGEIK
QQSTVNFLSHIITSSSLCVKGDWRLGNFLLGVCRRLLVHPGLDALLIPLADVLQHLACRY
GDTDIRDHARLYYTLLTTLSKDKLAGVLSQGYGEGGGQAKKRTFSCIVAESEGLTSLLTV
HRAKTIILKLLEEPQTETGSGLNQNEDNPEEASVALEQYRAQFDVPGFASEIPLNYQLTH
SGSADSCFDQLFSIRLHFSLTDDHYEPLGDVSVPCVFRERPPPSVKLRLKPRRPQPTSLH
ASAIFTTQDGLSWLTDLPDVHVAFQQTFLPLPAPETWGRGGRLSLFDGLWDEMSREEPTG
GATSLFCCQLQEEALKTLVEKHFLPYLVSDQSDEEEIKVLFFLPPQSHLLMRIRSEETVH
FNVATDNWQLLPHINSYLLTLTSSQEDTHV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacatctggacccagaggatcctctctttctcccgcagcccgtcccggttcctc
tccggtacaacagcggagggtttcctcgctgagctgctccgggagctccgggatgacaga
gccacttacagcctcaaggtcctcctgttgtccccgctctgcgagtccccgtctctgctg
tgtctctcggacttgctgggtgaggagacggccctggagctcatgtccatcttcaaccag
tgtcctcccaagtcggtccagtttcgctgccacctcctcctggccctcacctccgtcctg
gtctgcacttcctgcgtaaacaaccgctcccgagcgtcccaagacttcctggacctgctc
ctccagatatcccaggactccaatgacctccacggagacgttgctctgcgggccacagct
tgtgattgtctccgggagatggaggcctgttctccgggtctcctctcccagcgactggag
ctcttaggtgggctccggcagcgagaaacgtcccggctccaccaggcctacgcggggctc
cacaccctggtgttaaggaacgccgtttatcagttgacccaggaaaccggagccggagcc
gagcatctcaaagctcttctgggaggaaacacatgggaggcggagctggatctaatgaac
ggtaaagatgactcggcagttctgtcttctctcatccgggggcccatgggctcggtgccg
accctgcagacggggcccgactgtaaggagctgcgggcggtgctgtcttccctcctggag
gagtcgtacctccttacgcctctcagtcaggccgctctgctgcaccggctgaccgaggtg
gtcgccatggttcccggtgtctctcccgccgtgttcagagctcagctgctgagactgctg
ggcaccagtgaggtgtgcctcttccactccaccctgctgatgaagagtgcgttcacagac
agtctgttcagcgccgaagacgaagccttcctgctccagcggctggtggtcctctcccag
cacccgctgctgagcccccccgagaagctcttctacattgactgcatcctgagcttcccc
gagaaccggccaatcgggtgcggcgacgacgccctccccgtgctgctgaccccgcggctc
gcctcggtcctagtgcccaccgtattcaacgacagcgccaccttgttagcccgcctccac
ctgctgtgtctggtctacctggaggaagaggatgaagaggaagaagaggggagggggttg
ggttacctctacgatcacctgacctcgctgctgcgaatcgtggataatggaggcagccgg
gagatcgtggtcaccttcttcagagccgccttcctcttcctctcctacttcttccccgtg
gagcgcttctcccacagcctgatggaagaactgtgttcgctctaccttcgtcacacccac
ctggcgccgcacttcatcaatttagccgaccaagtccaggagcagctgtccgagtccaac
tgggcgacggagtttctgaaggcccttcaaggagccatcactgacgccgaactcacccca
aaagacttgagctggcacctcaagatgttagcaagagtggcggaggaaggagaaatcaag
cagcaaagcaccgtcaacttcctgtcccacatcatcacttcctcgtctctgtgcgtgaaa
ggcgactggcgcctcgggaacttcctcctcggggtttgccgccgcctcctggtccacccg
ggcctcgacgcgctactcatcccgctggccgacgtcctgcagcatctcgcctgtcgctac
ggagacacggacatccgggaccacgcccgcctctactacaccctgctgaccacgctgtca
aaggacaagctggccggggttttgtcgcagggatacggcgagggcggcggccaggccaag
aaacgaacgttttcctgcatcgtggcggaaagcgaagggttgaccagcctgctgacggtc
caccgggcgaagacaattatcctaaagctgctggaggagccacaaactgaaacaggaagt
ggactaaaccaaaatgaggataaccccgaggaagcgtccgtagcgcttgaacagtacaga
gcccagtttgacgtccctggcttcgcctcagaaatccctctcaactaccagctgactcac
agcggaagtgccgactcatgcttcgatcagctcttcagtatccgtctccacttcagcctc
acggacgaccactacgagccgctgggagacgtcagcgtcccgtgtgtgttcagagagagg
ccgccgcccagcgtaaagcttaggctgaaacccagacgaccccaaccaacctccctccac
gccagcgccatcttcaccacccaggacggcctttcctggctcacagatctaccggacgtc
catgtagctttccagcagaccttcctgcctcttcccgcccccgaaacctggggacgaggc
ggcagattgagcttgttcgatggcttgtgggatgagatgagccgcgaggagccaacagga
ggtgctaccagtctgttctgctgccagctgcaggaggaggctctgaagaccctggtggag
aaacacttcctcccctacctcgtatcagatcagtcggatgaagaggagatcaaagtgctc
ttcttcctcccgccgcagtctcacctgctgatgaggatccgctcggaggaaaccgtgcac
tttaacgtggccacagataactggcagctgctgccgcacatcaactcttatctgctgact
ctcacgtcctcacaagaagacacgcacgtctga
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