Pseudochaenichthys georgianus (South Georgia icefish): 117447259
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Entry
117447259 CDS
T09629
Symbol
cntn3b
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117447259 (cntn3b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
117447259 (cntn3b)
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
Contactins
117447259 (cntn3b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
Others
117447259 (cntn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_3
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
117447259
NCBI-ProteinID:
XP_033939835
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All DBs
Position
5:4738959..4808303
Genome browser
AA seq
1026 aa
AA seq
DB search
MMFPWKQIVLLSITGCLAAGAEDVILHGPRWRTEPTDLILPIDSPDQQATITCEAEGSPP
PQYRWSLNGTLIDLGNDYRRHMSGGSLIISNLDKNQDIGVYQCTAFNTWGSILSRRASLH
FAYLDNFKTLTVRNAVNVREGQGVVLLCGPPTYAGELTFAWIFNEYPYFVQQDSRRFISQ
ETGSLYIAKVETSDVGNYTCVVNNTVSKEKVLSSPTPLVLRSDGVMGEYEPKIEVHFPDS
VPAAKESVVKLECFALGNPVPEISWRRTSGIPFPSKVKMKNSNAVLEIPNLQQEDAGTYE
CMAENRRGKNAARGRISFHAKPHWLQTMTDTALSIEENLFWECKANGKPKPSYSWLKNGE
QVMAEGRVQIENGALSVAALNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPSFSKSPLR
ALLKARSGSEVTLECKPEASPPAISLWKKGNEILQRSGRITLLPNGTLKIANVTRRDAAV
YTCITKNQFGTASTSGRLLITEPTRITVRPTNMEIIVGESIVLPCQIACDPALEVSFSWA
FNGHLIDFQRDGDHFERVGGSISGDLMVRNIQLNHGGKYVCVIDTDVESLSTSAILVVKG
PPGPPDKVSVEEITDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGWQVVDTVPEEVNGN
MLTATVSGLNAWVEYEFRVVARNTVGLGEPSPASAMTRTEDTIPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPVGTVTWTRAVISTPGVYRYDFRNDTIPAFSPFDV
KVGAFNNRGEGPFSSIATVFSAEEVPGVPPKRVRTRIVSAVQIEVIWEALPAISERVLGY
EVMYWEDDTKPDTIGKVRISGNYTLVNITGLKGNTVYYLCVAAFNTGGPGPQSASINTTT
KKPPPDRAPLNIQWTMIGSTLTMHWDPVVAFETESKVTGYLVLLKRHRNNDISAISTNKT
TVELSLSSYDNYLIQIKTTSEGGEGVGSEPIHIHKLSMGARGSGATRLSPLVLSSVLISA
LLCSAW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttccatggaaacaaattgttctgctatcaatcaccggatgccttgcagccggt
gcagaggatgtcatattacacgggccaagatggaggacggagcccactgacctaattttg
ccgatcgactccccggaccagcaggctaccatcacgtgcgaggcagaggggagccctcct
ccgcagtacagatggtcactaaacggaacactcattgatctggggaatgactaccggcgt
cacatgtctgggggcagcctgatcattagcaacctggacaagaaccaagacatcggggta
taccagtgcacggccttcaacacgtgggggtccatcctcagccgcagagccagcctgcac
tttgcatatcttgacaacttcaaaactctcacagtgaggaacgctgtgaacgtccgcgag
ggccaaggagtggttctgttatgtggacctcctacatatgctggagagctgacatttgcg
tggatcttcaatgaatacccgtactttgtccagcaagacagcaggcgattcatctctcaa
gagaccgggagtctgtacatcgctaaagtggagacctcagacgttggcaactacacctgt
gtggttaacaacaccgtctccaaggagaaggtgctcagctctccaacaccgctggtcctc
agaagcgatggagtaatgggtgaatacgaacccaaaatagaagtgcatttccctgattcg
gttccagctgcgaaggaatcggtggtgaaactcgaatgcttcgctctggggaaccctgtc
ccagaaataagctggaggagaaccagcggcatccctttccccagcaaagtgaaaatgaag
aattcaaacgccgtccttgaaatccccaatttacagcaggaagacgccgggacgtacgaa
tgtatggcggagaatcggcgagggaaaaacgctgcacggggtcgtatctcattccatgct
aaacctcactggctccagacgatgacggacacagctctgtccatcgaagaaaacctcttt
tgggagtgcaaggcaaatggaaagcccaaaccgtcctacagctggctgaagaatggggag
caagtgatggctgagggccgggtacaaatcgaaaacggggccctctccgtagcggcttta
aacctgtccgattcagggatgtatcagtgtgtggcggaaaacaaacatggcattatttat
tccagtgcccaactaatggtgttagcttcacctcccagtttctccaaaagtccactaagg
gccctgctaaaagcccgctcaggaagtgaagtcactctggaatgcaagcccgaggcctca
cccccagcaattagcctgtggaagaaagggaatgagatcctgcagagaagcggaaggatt
accttgcttcccaacgggactttaaagatcgccaatgttacccgacgggatgcggccgtc
tacacgtgcatcactaagaatcagtttgggacggcaagcacaagtgggaggctgctcatc
accgagcccaccaggatcaccgtgaggcctactaacatggagattattgttggcgagagc
atcgtgttaccctgccagattgcctgcgatccagctctggaggtttctttctcgtgggca
ttcaacggccatctcatcgacttccagcgagacggcgatcatttcgaaagagtgggcggg
agtatatcaggggatctgatggttcgtaacatccagctgaaccacggagggaaatatgtc
tgcgttattgacactgatgtggagagcctgtccacctctgccatcttagttgtgaaaggt
ccgccaggtcctccagacaaggtgtcggtggaggagatcacagacagcactgcccagctc
tcctggactccaggaagggacaatggcagccccatcaccggctacatcatccaggccagg
actcctttcactgtgggctggcaggttgtggatacagtgccggaggaagtcaacgggaac
atgctgacggccacggtgtccggtctgaacgcctgggtggagtacgagttcagggtagtg
gctcgcaacaccgtgggcctcggagagcctagtccagcctcggccatgaccaggacagag
gataccattcccgatacagctcccactgatgtcggaggtggaggcggcacaaagtctgaa
ttagtgataacatgggagcctgttcccgaggagctgcagaacggagagggcttcgggtac
atcatcgccttcagacccgtgggcacggtcacgtggacccgcgcggtgatctccaccccc
ggcgtgtatcggtacgacttccgcaacgacaccatcccggcgttctcgccgtttgacgtg
aaggtgggggcgttcaacaaccgaggggaggggcccttcagctcgatcgccaccgtgttc
tcggcagaggaagtccccggtgtgcctcctaagagggtgaggaccaggattgtgtctgcg
gtgcaaattgaagtgatctgggaagcccttcctgcgatatcggaaagagtgctcggatat
gaggtcatgtactgggaagacgacaccaagcctgacactattggcaaagtgcgcatatct
ggaaactacacgctggttaacattacggggctgaaaggaaacacagtctactacctctgt
gtggctgcattcaatacgggcggccctgggccacagtctgcgtccatcaacaccaccaca
aagaaaccacctccagatcgggcgcctctcaacatacaatggaccatgattggctccaca
cttacgatgcactgggatcccgtcgttgcttttgagacggagtcaaaggtcactggatac
ttggtcctgctgaaaagacatcgcaacaatgacatcagcgctatctccaccaacaagacc
actgtggagctcagcctctcatcctacgacaactatctcatccagatcaagaccacgagt
gagggcggcgaaggtgtgggcagcgaacccatccacatccacaaactaagcatgggagcg
cggggctcgggagcgactcgcctcagcccattggtcctctcttcagtcctcatcagcgca
ctgctctgctccgcctggtga
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