Pseudochaenichthys georgianus (South Georgia icefish): 117447314
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Entry
117447314 CDS
T09629
Symbol
rbl1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04110
Cell cycle
pgeo04218
Cellular senescence
pgeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117447314 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117447314 (rbl1)
04218 Cellular senescence
117447314 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117447314 (rbl1)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
117447314 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
SLH
Motif
Other DBs
NCBI-GeneID:
117447314
NCBI-ProteinID:
XP_071059346
LinkDB
All DBs
Position
5:complement(577576..602889)
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AA seq
1021 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRRSLETLCQELNMDEQTAAETLENFTAIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRTAKLSLIQFFSKMRKWADMSSLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFMDMFQNPQGGEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPALYRAD
GHVSPDQPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLYQKQILRGNEDNLTELLD
PQSFIDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKTVQETSASRNNAQSQM
KQHVEKSASLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVSGLRTAPSENMLQV
FRSCSRNPTESLLARVKTLGQTFKEHYTNDSADMPGSHIDFAENRLKLAEILYYKVLENV
MVQETKRLPGKDMSVLLEQDMFHCSLMACCLEVVLFSYSSQRTFPWIINIFKLTPFYFFK
VIEVFIRSEEGLSRDMVKHLNLIEEQVLDSRAWSADSALWSVLQAAGNKVPTVEEVNFSS
SLDTGSGPGSSGVQSHLPMLALSPIIHPRIKEFRSGLGSARKDVPPSPLSLHDRYSSPAA
GSAKRRLFGRGGAPCSASLCKKTHLGRLYPQSRSFGQDPSFMTIGLNNDRTITLIPVQPC
DSSGTITAQFLLTTSPSRPPPPPPMTSDPPAAGSGRPRRTGSLALFFRKVYHLASLRLRD
LCVKMDVSSELRGKIWTCFGHAVGSLTALMKDRHLDQLMLCCVYIISKITKETHTFHDIM
KCYRGQPQASSHVYRSVLLRHTPREQVTDENMDVDPVSGGESAEKTNQAPGEANATTNQE
RRNAGDLIQFYNSVFVXEMKSFALRYAVHDNRVDPPPLSPFPSVRAASLPRRVSQRHSLY
VSPTRTLRPASHRTPTHTGSTAAPPRSCRTLTGDSSGLGQQEEGLHHGGRRDDVISVRLP
Q
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaagagtcgtccgattctgagtcgggcaggatggaggagagctcggttcgg
aggagcctggagactctgtgccaggaactgaacatggacgagcagacagccgcagaaaca
ctggagaacttcactgccatctggaacacatacaccctggagggggaggtggtgcactgg
ttggcctgctctctgtacgctgcctgcaggaagggctccactcccaccgtgggtaaagga
ctgatggagggaaactgcgtgtctctcaccaggatcctccgcaccgccaaactcagtctg
atccagttcttctcgaagatgaggaagtgggccgacatgtcgagcctctctcaggacttc
cggctgcgcatggatcgactcgagaggaacttcgaggtctcgaccgtcatcttccgcaag
tttgagcccatcttcatggacatgttccaaaacccgcaggggggggagccgcctcgacag
ccacgcagcaggaagcacaggaggttgccgtgtcacatcagcgatgtgttcaagttctgc
tggactctgtttgtctacacaaaaggtaacttccgtatgatcggagacgacctggtgaac
tcgtaccacctgctgctctgctgcctggacctggtgttcggaaacgctctgctctgcgcc
aacaggaaggacctcatcaaccccaccttcagaggcctgcctgctctgtaccgcgctgac
ggccacgtgtctccggaccagccccccccctgtgtgttggagcgtctctgtgagctgcat
gatggcctggtggtcgaggccaaggggatcaaacagcactacttcaaaccatacatccag
aaactgtaccagaaacagatcctgagaggaaacgaggataatttgaccgagctgttggac
cctcagagcttcatcgataacaacaaagccataaacagggagtatgaggagtacgttctg
acggtgggagatttcgacgagcgagtgtttctcggcgcggacgctgacgaggaaatcggg
acgccgaggaagaccgtccaggaaacgtctgcgagccgaaacaacgctcagagtcagatg
aagcaacacgtggagaagtcggcctctctcgccccctccacccctctcacagggcgggtg
tatctgaaggagaaggatctgctcgtgactcccgtttcctcggcaacgcagagtgtcagc
cggctgcagagcatggtgtccggtctgaggacggcgccgagcgaaaacatgctgcaggtc
ttcaggtcgtgttccagaaatcccaccgagtcgctgctggccagagtcaagaccctcgga
cagacgttcaaagaacattacaccaacgactccgcggacatgcccggctctcatatagat
tttgcagagaatcgtctgaagctggcagagatcctctactacaaagtcctggagaacgtc
atggtgcaggagaccaagcgcctgcctgggaaagacatgagtgtgttattggagcaggac
atgttccactgctctctgatggcgtgctgtctggaggtcgttctgttctcctacagctcc
cagaggaccttcccctggatcatcaacatcttcaaactcacacccttctacttctttaag
gtgatcgaggtgttcatccgctcggaggaaggtctctccagagacatggtgaagcacctg
aacctgatcgaggagcaggtgctggacagcagggcctggagcgcagactctgccctctgg
agcgtcttgcaggctgcaggcaacaaagtgcccacagtggaggaggtgaatttctcctcc
agtctggacacgggttcaggtcctggctccagtggagttcagtctcacctgccgatgctc
gccctctcgcccatcatccacccccgcatcaaagagttcagatcgggcctgggcagcgca
cgcaaagacgtgcctccctccccgctgtcgctccacgacaggtacagctctccagcggca
ggcagcgccaagcggcgtctcttcgggcgggggggggcaccgtgctcagcatccctctgc
aagaaaacccatctcggccgcttgtatccgcaatctcgttctttcggtcaggacccatcc
ttcatgaccatagggctgaataacgaccgcaccatcacgctgatcccagttcagccgtgt
gattcctccggtacgatcaccgctcagttcctgctcaccacctccccgagtcgcccccct
cctccccctcccatgacctctgaccccccggcggcaggaagcggacgcccgcgacgcacc
ggctccctcgcgctgttcttcaggaaggtgtatcacctggccagtttgcgtctgagggat
ctgtgtgtgaagatggacgtgtcgtcggagctgcggggaaagatctggacgtgtttcgga
cacgctgttggttcactgacggctctgatgaaggaccgacacctcgaccagctgatgctc
tgctgcgtgtacatcatatcaaagatcaccaaagagactcacaccttccacgacatcatg
aagtgttaccgtggccaaccacaggccagcagccatgtgtaccgcagtgtgttactgcgt
cacactcccagagagcaggtgactgacgagaacatggatgtggatcctgtctcaggtgga
gaatcggcagagaagaccaatcaggcgccaggagaagccaacgcgaccaccaatcaggag
aggaggaacgcgggtgacctcatccagttctacaacagcgtcttcgtcnctgagatgaag
agcttcgcgctgagatacgccgtccatgacaaccgggtggaccccccccccctctctccg
ttcccctcggtgcgcgctgcctctctcccccgcagggtttctcagagacactcgctctac
gtttctcccacaagaactctgcggcctgcctcacaccgaactcctacacatacaggatca
acagcagcccctccaaggagttgtcggaccttaaccggtgattcgtcagggctcggtcag
caggaagagggccttcaccatggagggcgacgtgatgatgtcatcagcgtgcgactcccc
cagtaa
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