Pseudochaenichthys georgianus (South Georgia icefish): 117447346
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Entry
117447346 CDS
T09629
Symbol
matn4
Name
(RefSeq) matrilin-4
KO
K19467
matrilin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117447346 (matn4)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
117447346 (matn4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
cEGF
EGF_CA
VWA_2
EGF_3
EGF_LRP2
EGF
hEGF
Matrilin_ccoil
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
117447346
NCBI-ProteinID:
XP_033939945
LinkDB
All DBs
Position
5:1900435..1932954
Genome browser
AA seq
905 aa
AA seq
DB search
MKMRLVFLFLALVVLVAARPKSGPKQKCKSGPVDLVFLIDSSRSVRPHEFETMRKFMIDI
LSTLDIGLNATRVGVVQYSSQVRTEFSLKAHAKLDTMVKGINEIIPLAQGTMTGLAIKFV
MDTAFVAEEGDRPKVPNVMVIVTDGRPQDRVAEVAIEAREKGIEIFAVGVARADMASLRA
MASPPFEDHVFLVESFDLIHQFGLQFQDKLCGVDLCVESKHGCEQICESSPGSFHCLCLP
GYSLNEDGKTCAAIDLCAEGKHDCAQICNASPGVFTCDCNAGYKLNDDKKSCTMIDFCSF
GNHSCDHECVSVLNGYHCRCQEGHRLLENGKTCQAIDLCAEGKHDCEQICNASPGAFTCD
CNTGYTLNDDKKTCTPIDLCAEGKHDCEQICISAPGVFTCDCNAGYTLNDDKKACTPIDL
CAEGKHDCEQICISAPGVFTCDCNAGYTLNDDKKACTPIDLCAEGKHDCEQICISAPGVF
TCDCNAGYTLNDDKKACTPIDLCAEGKHDCEQICIASPGAFTCDCNAGYTLNDDKKACTP
IDLCAEGKHDCEQICISAPGVFTCDCNAGYTLNDDKKACTPIDLCAEGKHDCEQICISAP
GVFSCDCNKGFKLNTDKKTCTDMDMCSTVKHGCEHQCVNTPGSLYCICPEGQLLQEDGKS
CGTCKSANIDLVLLIDGSKSVRPQNFELVKKFVNQVVDSLDVSAHGTRVGFVQYSSRVRT
EFPLNMYHTAAEIKAAVMKVDYMEKGTMTGLALKHMLENSFSESEGARPLDRNIPRIGLV
FTDGRSQDDITEFAKKAKEAGITMYAVGVGKAVEDELREIASEPTEKHFYYTTDFSAIST
IAENLRLNICPAESQGEIEVKDPCACESLVEFQQATMSSLEQLTQKLSAMTARLEQLENQ
LLSKK
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgagactcgtcttcctcttcctggcgctcgtcgtcctcgtcgccgcccgaccc
aaatcaggtccgaagcagaagtgtaagtccggtccggtggatctggtgtttctgatcgac
agctctcgcagcgtccggcctcacgagttcgagaccatgaggaagttcatgatcgacatc
ctgagcacgctggacatcggactcaacgccaccagagtgggggtggtgcagtactccagc
caggtccgcactgagttctccctgaaggctcacgctaaactggacacgatggtgaagggc
atcaacgagatcatccctctggctcagggcaccatgaccggtctcgccatcaaatttgtg
atggacacagctttcgtcgcggaggagggagacaggccgaaggttcccaacgtgatggtg
atcgtgacggacggtcgtcctcaggatcgagtggcagaagtggcgattgaggcaagagag
aaaggcatcgagatcttcgctgtgggcgtggccagagccgatatggcgtccctcagggcg
atggcgtcccctccattcgaggaccacgtcttcctggtcgagtcttttgatctgatccat
cagttcggactgcagttccaggacaaactctgcggagtggatctgtgtgtggagtcgaag
cacggctgtgagcagatctgtgagagttcgccgggatctttccactgcctctgtctgccc
ggatactctctgaacgaggacgggaagacatgcgcagccattgacttgtgtgcggagggg
aaacacgactgtgcgcagatctgcaacgcctctccgggcgtcttcacctgcgactgcaac
gcaggatacaaactgaacgacgacaagaagtcctgcacaatgatcgacttctgttcgttt
gggaaccacagttgtgatcatgagtgtgtgagtgtgctgaacggctatcactgccgctgt
caggagggtcatcggctgctggagaacgggaagacctgccaggccattgacctgtgtgct
gagggtaaacacgactgtgagcagatctgcaacgcctctccgggcgctttcacctgcgac
tgcaacacaggatacactctcaatgacgacaagaagacctgcacacccattgacctgtgt
gctgaggggaaacacgactgtgagcagatctgcatcagcgctccgggcgtcttcacctgc
gactgcaacgcaggatacactctcaatgacgacaagaaggcctgcacacccattgacctg
tgtgctgaggggaaacacgactgtgagcagatctgcatcagcgctccgggcgtctttacc
tgcgactgcaacgcaggatacactctcaatgacgacaagaaggcctgcacacccattgac
ctgtgtgctgaggggaaacacgactgtgagcagatctgcatcagcgctccgggcgtcttt
acctgcgactgcaacgcaggatacactctcaatgacgacaagaaggcctgcacacccatt
gacctgtgtgctgaggggaaacacgactgtgagcagatctgcatcgcctctccgggcgct
ttcacctgcgactgcaatgcaggatacactctcaatgacgacaagaaggcctgcacaccc
attgacctgtgtgctgaggggaaacacgactgtgagcagatctgcatcagcgctccgggc
gtcttcacctgcgactgcaacgcaggatacactctcaatgacgacaagaaggcctgcaca
cccattgacctgtgtgctgaggggaaacacgactgtgagcagatctgcatcagcgctccg
ggagtcttcagctgcgactgcaacaaagggttcaaactcaacacagacaagaagacatgc
acagacatggacatgtgtagcacggtgaaacacggctgtgagcatcagtgtgtgaacacg
cctggatctctttactgcatctgtcctgaaggccagctgctgcaggaggacgggaagagc
tgcggcacctgcaagtctgcgaacatcgacctggtgctcttgatcgacggctctaaaagc
gtccggccacaaaacttcgagctggtcaaaaagtttgttaaccaggtggtggactctctg
gacgtctcggctcacggcaccagagtggggttcgtccagtactccagtcgggtccggact
gagttccctctcaacatgtaccacaccgccgccgagatcaaagccgccgtcatgaaggtg
gactacatggagaaaggcacgatgacgggcctcgctctgaaacacatgctagagaacagt
ttctctgagtctgaaggagctcgtccgttagacagaaacatcccgaggatcggactcgtg
ttcacggacggacgctcgcaggacgacatcactgagttcgccaagaaggccaaagaagcc
ggtatcaccatgtacgcggtgggcgttggtaaagcggtggaagacgagctgcgtgaaatc
gcgtctgaaccgacggagaaacatttctactacacgactgatttctccgccatcagcacc
atcgcagagaacctcagactcaacatctgcccagcggagagtcagggggagatcgaggtg
aaggacccctgtgcctgtgagagtctggtggagttccagcaggcgaccatgagcagcctg
gagcagctcactcagaaactgtccgccatgacggcccgtctggagcagctggagaaccag
ctgctctccaagaagtga
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