Pseudochaenichthys georgianus (South Georgia icefish): 117447401
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Entry
117447401 CDS
T09629
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117447401 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117447401 (irf6)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117447401 (irf6)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117447401 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117447401
NCBI-ProteinID:
XP_033940022
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Position
5:complement(20569763..20575444)
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AA seq
492 aa
AA seq
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MSVTPRRVRLKPWLVSQVSSGRYPGLVWIEREAMRFKIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFHLVYDGTKEVPMNPLKIYDVCDIPQPL
SNQGSSDAGSWTPRDDDGGDEDIPDTPESLPPYPSNGTSPSPLIMWSPMSSGSPMQPSSC
PPSNEVWPKEEPVKIWPKEEPVDVEMHPTPLSEMPHAPLPDVPMHPPSLPEVFFASPETW
ISSLPMTDLEVQFLYRGKEMCPTGNISNPQGCRLFYGDLGPMVNQEELFGPVNLEQLRFP
TTEHIANEKQRIFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPAAPNLI
ERQRKIKLFCLESFLSGVIAHQRGQTPIPPLFEINLCFGEEWPDGRPKERKLIMVQIIPV
VARMISEMFSGDSTRSFDSGSVRLQISIPDIKDNIVTHLKQLYCLLQTHQGQDGWTLPPG
PGLNIVQAMQAQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcacccctcgacgtgtccgcctgaagccctggctggtgtctcaggtgtccagc
gggcgatacccggggctggtgtggattgagcgcgaggccatgcgcttcaagatcccatgg
aaacacgcgacacgacatacaccgcagcacgaggacgaggacaccatatttaaggcgtgg
gctgtggagacggggaagttccaagagggcgttgatgaacctgatcctgccaagtggaaa
gctcagcttcgatgtgctctgaacaaaagcagagagtttcacctagtctacgatggcacc
aaagaggtccccatgaatcctctgaagatttatgatgtgtgtgacattccacagcccctc
agtaaccaaggttcctcagatgctggttcttggactccacgtgatgatgatggtggtgac
gaagatattccagatacaccagagtctctccctccgtacccatccaatggtaccagtccc
tctcctctcattatgtggtctcctatgagctctggatcccccatgcaaccttccagttgt
cccccttcaaatgaggtctggcccaaagaggagcctgttaaaatctggcctaaagaggag
cctgtggatgtggagatgcaccccacacccctgagtgaaatgccccatgcccctctgcct
gacgtcccaatgcatcccccttctctacctgaagtattcttcgcctctccagagacgtgg
atcagttccctcccgatgacagacctggaggtgcagttcctgtacagagggaaggagatg
tgtcccacagggaacatcagtaaccctcagggctgtaggctgttctacggagacctcggc
cccatggtcaaccaggaggagctgttcgggccggtgaacctggaacagctacgctttccg
accacggagcacattgccaatgagaagcagaggattttcactaaccgcctgctggatgtg
atggacagaggcctcatcctggaggtcagcggtcacgacatctatgcagtgcgtctctgc
cagtgcaaggtgtactggtccggtccctgtgctccaaaccctgctgcaccaaatctcata
gagcgccagagaaagatcaaactcttttgcctggagtcttttctcagtggagtaatcgcc
caccagcgtggccagacaccaatccctcctctatttgaaatcaacctatgttttggagag
gagtggcctgatggcaggcccaaagagagaaaacttatcatggttcagattattccagtg
gtggcacgtatgataagcgagatgttttcaggggacagcacgcggtccttcgacagcggc
agcgttcgcctgcagatctcaatcccagatatcaaagacaacatagtgacccacctaaag
cagctgtactgcctgctgcagacccaccagggccaggacgggtggacattgccccctggc
ccgggcctgaacattgtccaggctatgcaggcacagtga
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