Pseudochaenichthys georgianus (South Georgia icefish): 117447426
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Entry
117447426 CDS
T09629
Symbol
cyld2
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04217
Necroptosis
pgeo04622
RIG-I-like receptor signaling pathway
pgeo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117447426 (cyld2)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117447426 (cyld2)
04625 C-type lectin receptor signaling pathway
117447426 (cyld2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117447426 (cyld2)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117447426 (cyld2)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117447426 (cyld2)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C67
117447426 (cyld2)
Ubiquitin system [BR:
pgeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117447426 (cyld2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
117447426
NCBI-ProteinID:
XP_033940054
LinkDB
All DBs
Position
5:complement(7012913..7024565)
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AA seq
710 aa
AA seq
DB search
MEPRAAVKEQFFIVIRGKSRKGFCRGCIGRVETETPLGELTGLLYCGGSNALNPKSGGTV
RKEDTYSLTRHQAQLLLFVSSVSKRLELLCNPQLFSAICELSQDDLVVVKHKKGYLPGLV
KNLMQIGRKEHKDDLHMLGFEVEFVDSDQNLSPKKPLPLFSAADVVQVVPSYSVPLGLHW
KDGQSGGLNRKAVTRINSMPNIGTHARQTRENLAEQNTVQGQSPSASHVPLEVGSLVEVV
SNSGVTVYGVIRWLGVPAGKTNEWAGIELDYDVSGCSDGKYGSQQYFTCKASRALFVPVT
KCTPDSRFSCSSSGRGTSKPTDTLLVPLYEDPEEYAPPFPESEALSLLVGKMKGIQGHIN
SCYLDVTLFSLFSSSVTLDNIYQTPADTERPIMCTFREIVNRLRRQGFVPAQSVMNFRQQ
LGCDTFRTEEKDPEEFITVLFQKVLRMGPLIKLRSGQDTCQGAYTFQIFLEKGQMGQMPS
VQQLLDTSCLSGDLKFEEAPSCLMVQMPRFGNKYKMFSHIIPSIELDITDLLYNSPRECF
LCGHLAEFECLQCLPDPKMQPGRIKPFCSTCNTQVHSHPSRQAHSPRALPAPAASDTPVP
RHTMQLFAVLCIQTSHYVSFLKYGPDPHSWLFFDCMADRHGDDQHGYNIPEVRACPELGD
FLSQPEEDMARSHPSQTPELVRRLLCDSYMFLYQNPATPLSRSNHEEPLN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagagctgcagtgaaggagcagtttttcatcgtgatacgagggaagtcaagg
aaaggcttctgccggggatgtatcggtcgtgtggagacggagacgccgcttggggagctg
acggggctgctgtactgcggggggagcaacgctttgaatcccaagagcggaggcaccgtg
aggaaggaggacacctactctctgacccgccaccaggcccagctgctgctcttcgtttcc
tctgtgagcaaacgcctggagctgctgtgcaacccccagctgttctctgctatctgcgag
ctgtctcaggacgacctggtggtggtgaagcacaagaaaggatacctgccggggctggtg
aagaacctgatgcagatcgggaggaaggagcacaaagacgacctgcacatgctcggcttc
gaggtggagtttgtggacagtgatcagaatttgtcccccaagaaacctctgcccctgttc
agcgcggcggacgttgtgcaggtggtcccgtcgtactcggttcccctcggactgcactgg
aaggacggacaatctgggggtctgaacagaaaagcggtgacgcgcatcaactccatgccg
aatattggaactcatgcacgacaaacgagggagaaccttgcggagcagaataccgttcag
ggccaaagtccaagtgcatctcatgtgcctctggaggtggggtccctggtggaggtggtg
tccaactcgggggtcacggtgtacggagtcatccggtggttgggggtccctgcagggaag
actaatgaatgggctggaatcgaactggactatgatgtgagcggttgctctgatgggaag
tatggaagccagcagtatttcacctgcaaagcgagcagggctttgtttgttcccgtcaca
aagtgcacccccgacagccggttcagctgctcctcctcaggaagggggacctccaaaccc
acagacacacttctagttcctctgtacgaggaccctgaggagtacgcccctccattccct
gaatcggaggccttgtctttgttggtggggaaaatgaaggggattcagggtcacatcaac
tcgtgttaccttgatgtcacactcttcagtttgttcagctcctcggtgaccctggataat
atctaccagacgcctgccgacacggagagacccataatgtgcactttcagagaaatcgtc
aaccgtttgcgcaggcaaggatttgtgccggctcaaagtgtaatgaacttcagacaacaa
cttggctgcgacacattccgaacggaggagaaagacccggaggagttcatcacagtcctc
tttcagaaagtgcttcgcatgggccctttgatcaagctccgatcaggacaggacacatgt
cagggggcctacacattccagatctttctagaaaaaggacagatgggacagatgccctcc
gtccaacagctgctggacacatcctgcctgtcaggggacctcaagtttgaagaggcgccc
tcctgtctaatggtgcagatgcccagatttggaaacaagtacaagatgttttctcacata
atcccctccattgagctggacatcacagatctcctttataactctccgagggaatgcttc
ctctgtgggcatctggctgagttcgagtgtcttcagtgtctcccagatcccaaaatgcag
ccggggagaatcaaaccgttctgctccacatgtaacacgcaggtccacagccacccctct
cggcaggcccactcccccagagccctgccggcccccgcggcctctgatactccggtcccc
cgacacaccatgcagctgtttgccgtgctctgcattcaaaccagccactatgtgtccttc
ctcaaatacggccctgaccctcactcctggctcttctttgactgcatggcagacagacat
ggtgacgatcaacatggctacaacattcctgaggtccgagcttgtccggagctgggtgac
ttcctgtcccagccggaggaggacatggcccgctcccacccctcccagacgcctgagctg
gtgcgcaggctgctgtgtgactcctacatgtttttataccaaaacccagccacgccactt
tctaggtcaaaccacgaggagcccttgaactga
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