Pseudochaenichthys georgianus (South Georgia icefish): 117447539
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Entry
117447539 CDS
T09629
Symbol
stra6
Name
(RefSeq) LOW QUALITY PROTEIN: receptor for retinol uptake stra6
KO
K23088
vitamin A receptor/transporter (stra6) family protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117447539 (stra6)
Transporters [BR:
pgeo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
117447539 (stra6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RBP_receptor
Motif
Other DBs
NCBI-GeneID:
117447539
NCBI-ProteinID:
XP_033940152
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Position
6:complement(29952993..29969103)
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AA seq
664 aa
AA seq
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MDKNEFLDYEYPDLGPVPSKIEAEIIPPCDPTADDRLYHICITAISLVVMLILAILARQR
KVGNRQKGLPGLLSPVNFLDHTQHKGLAVAVFGVLLCKLWGLIISPNPLPFTTDTENKQN
WVILGIFYYPALYYPLLACGTLHNKVGYVLGSLLSWTHFGVLVWQKIDCPRTPLIHKHYS
LFSSLPQIACLAFLSFQYPXFLFKGLQGTEKNNATEDLSSSYYNDYVKKILKKKPTKIST
SSTETPKLHQRIIDAVKSYIYTPEEAFRFPLKLAISGVVSFITLYQVGLLLISAVVPPLQ
TARSGVDEDIANVLAGFKIMLSPDKHEVVRIVTHYMWCVEVCFISAMTVSGLVSLAMLMR
SMVLHRSNLKGLYRGDIYNVYNWQRSIRASRPALVCWMGYTSFTAAYVFLGMIIQTMVFF
LCLLVAVFLIIMPILHGENLILFQILLSMWPFWLMIVLAVLIQHLTGRFCFIKKNAGTRD
LHNRXGHLFLLTYLLFPVNVLIGVLLAVWRIIITALFNIVHMGRMDISLLNRNVEAFDPA
YRCYAHYLKIEVSQSHPVMKAFCGMLLQAGGQESSSPQRARDAEEGIQLVNQEKTQHKVS
TAKRARRHWQLLYTLVNNPSLVGTRKHFQRQTTESFLNGSLNRSAKDGSKKEAAAKETEV
AASN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggataagaatgaattcctggactatgagtacccagacctgggtcctgtgccatccaaa
attgaagcagaaataatccctccatgtgaccctaccgctgatgacaggctctaccacatt
tgcatcactgcgatatctctcgtggtcatgctgatcctagcaatcttagccagacaacgg
aaagtgggcaacagacagaaaggactcccaggtttactcagtccggtcaacttcctggat
catacgcagcacaagggcctagcagtggctgtgtttggagtgctgctgtgcaaactgtgg
ggcctgatcatatcgccaaaccccctccccttcacaacagacacggagaataaacagaac
tgggtgatcctgggaatcttctactaccccgcactatactaccctctcctggcatgtggc
actttgcataataaagttggctatgttcttggtagcctcttgtcctggacgcactttggt
gttctggtctggcagaaaatagactgtccgagaacacctctgatacacaaacactactcc
ctgttctccagcctgccccagatagcttgcctggcattccttagtttccagtatcccntt
ttcctattcaagggcttgcagggcacagaaaagaacaatgcaacagaggatctcagcagc
agttactataacgactatgtgaagaaaatccttaagaagaagcctaccaaaatcagcaca
tccagcactgaaacgccaaagctccatcaaaggataattgatgccgtgaagtcatacatt
tatacaccagaggaagctttccgttttcctctgaagttggctatatctggcgtggtgtca
tttattaccctgtatcaggtgggccttcttctgatctcagccgtggtgcctcctctccag
accgcccgctcaggagtcgatgaagacatcgccaacgttttagctggcttcaagattatg
ctgtctccagacaaacatgaagtggttagaatagttacacattacatgtggtgtgtagaa
gtgtgctttatctcggcgatgaccgtctccggcttggtgagcctggccatgctcatgcgg
tccatggtcctgcatcggtcgaacctgaaggggctgtatagaggagatatctacaatgtt
tacaactggcagagaagcatcagggcttcacggccagcgctggtctgttggatgggatac
accagcttcactgcagcttatgttttcctcggtatgatcatccaaaccatggtgttcttc
ctctgccttctggtcgccgtcttcctcatcatcatgccgatactgcacggcgagaatctg
atcctttttcagatcctgttgagcatgtggcccttttggctgatgattgtcttggctgtg
ttgattcaacatctcactggcaggttttgcttcatcaaaaaaaatgcaggcacacgagac
ttacacaaccggtgagggcatttgttcctgctgacgtacctgctgtttcctgtcaatgtt
ctgatcggggtgctgctggcagtgtggcgcatcatcatcacagccctgttcaacatcgta
cacatggggcgcatggatatcagtctccttaaccgcaacgtggaggcgtttgacccagcc
taccgctgctatgctcattatctgaagatagaggtgagccagtcccacccggtgatgaag
gccttctgtgggatgctgctgcaggccgggggccaggagagtagttctccacagagggca
cgggacgctgaagaggggatccagctggtcaatcaggagaagacacagcacaaagtgtcc
actgcaaagagggcccgcaggcactggcagctcctctacacgctggtcaacaacccctcc
ctggtgggcaccaggaagcacttccagcgtcagaccactgagagctttctgaatgggagc
ctcaaccgcagcgccaaggacgggagcaaaaaggaggcagcagccaaggagacggaggtg
gctgccagcaactaa
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