Pseudochaenichthys georgianus (South Georgia icefish): 117447602
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Entry
117447602 CDS
T09629
Symbol
rfx4
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117447602 (rfx4)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Other basic domains
RF-X
117447602 (rfx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
117447602
NCBI-ProteinID:
XP_033940257
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All DBs
Position
6:23689129..23707273
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AA seq
734 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNMSNDEHEEKENNRASKPHSTPA
TLEWLEENYEIAEGVCIPRSALYMHYLDFSEKQDTQPVNAASFGKIIRQQFPALTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPANLSEERVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSNTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKIALHE
LPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVINSADITFQMLEDWRNVDLNSITK
QTLYTMEDSQDDHRQLIIHLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAAKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERAIEL
MRAMKAEGSTAEREEEFPVKEPTPTSPSPGSFSPARSVHSVGVSSDSSPTAAVSPEFSGV
PTTTGAVQSYTWSLTYTVTTAGGSTPEAGQQLSCMRNSAPVPPPSSTHRLPVYREEHGYT
GSYNYGSYANQHPHSIQSQYPSLAHDPAIPPPLHYSAYHRSSAQYQLNGQMARMEPCLMG
STPRLHPAPVAPRWPDVSPANSCYTSPPMHSSRYAASGDMYSPLGPRRNSEYEHSQHFPG
FAYINGEATTGWAK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgggctgctggaggagcctgatatggattccacagagagttggattgaacga
tgcctcaacgagagtgagagcaagcgatactccagtcacacgtctctggggaacatgtcc
aatgatgaacatgaagaaaaagaaaacaacagagcctcaaaaccacattcgacaccggct
actcttgaatggctagaagagaactatgagatagctgaaggtgtgtgtatccccagaagt
gccctctacatgcactacctagacttcagtgagaagcaagacacgcagcctgtgaacgca
gccagcttcggaaagatcataaggcaacagtttccagcattaactacccgaagactgggg
acaagagggcagtctaaataccactactacggcatagcggtgaaggagtcctctcagtat
tacgatgtgatgtactccaaaaagggagctgcgtgggtgaacgagacggggaagaaagag
gtcacaaagcagacagtggcgtattcaccgcgctccaaactggggacactcctgccagag
tttccaaatgtcaaagacctaaatttgcccgccaacctgtcagaagagagggtgtcaacc
ttcatcatgatgtacagaacgcactgtcagaggatactggacactgttattagagccaac
ttcgatgaggtccaaagcttcttgctgcacttctggcagggcatgcccccccacatgctc
cctgtcctcggctccaacactgtggtgaacatagtcggtgtttgtgactccatcctctac
aaggccatctctggggtgctgatgcccaccgtcctgcaagcactgcctgatagtttgact
caggttattcgaaaatttgccaaacaacttgatgagtggctcaaaatagcacttcacgaa
cttcctgaaaacctgaggaatatcaaatttgaattatcaaggagattttcccagattcta
aagcggcaaacatcattaaaccatctctgtcaggcatctcggactgtgataaacagtgcc
gacattacctttcaaatgctggaggactggaggaatgtggacttgaacagcatcactaag
cagacactttacaccatggaggactcacaagatgatcacaggcagcttattatccacttg
tatcaggagtttgaccgtctgttggaggagcagtctcccatcgaggcgtacatcgagtgg
ctggactccatggtggaccgctgtgtcgtcaaggtggcagcgaagaggcccgggtgcctg
aagaaggtggcccaacagttcctgctcatgtggtcgtgctttggtaccagagtcatccgg
gatatgaccctccacagcgcgcccagctttgggtccttccacctgatccatctcatgttt
gatgattatgtgctctacctgctggaatccctgcactgccaggagagagccatcgagctc
atgagggccatgaaggcagagggcagcacagcagagagagaggaggaattcccggtgaaa
gaacccacccccacctccccctctccaggatccttctctcccgctcgctcggtgcactca
gtgggcgtttcctcggacagctcccccactgcagccgtgtccccggagttcagcggggtc
cccaccaccacaggcgctgttcagtcatatacctggtcccttacatacacagtgacaaca
gccggcggctccactcctgaggccggacagcagctgtcctgcatgaggaacagcgctcca
gtcccccccccatcctccacccaccgcctgccagtgtacagagaggagcatgggtatact
ggtagctacaactatggaagctacgccaaccagcaccctcactccatccagagccagtat
cccagtctggcccatgatccagcgatcccaccccccctccactactccgcctaccaccgc
tcttctgcacagtaccagctcaacggccagatggctcggatggagccttgcttgatgggc
agcactcctcggttgcacccggcacctgtcgccccccggtggccagatgtgtcgccagct
aacagctgttacaccagcccacctatgcattcatcgcgctatgctgcctctggtgacatg
tactctcccctgggcccacgcaggaactcagagtacgaacactcgcagcattttcccggc
tttgcctacataaacggggaggccaccacaggctgggcgaaataa
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