Pseudochaenichthys georgianus (South Georgia icefish): 117447719
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Entry
117447719 CDS
T09629
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
117447719 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117447719 (rag1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117447719 (rag1)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117447719 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_pre-RNase_H
RAG1_C
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
TRAF3_RING
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
117447719
NCBI-ProteinID:
XP_033940455
LinkDB
All DBs
Position
6:complement(22538433..22545036)
Genome browser
AA seq
1068 aa
AA seq
DB search
MMEESLETDGPRSSMPAELHHPHSKYSQWKFKLFRLKSMEKAPLPSDSQPEKGAVLGISP
PAALNTELDNDICPGSVMKLCLGGKSKENVEGPGWRVDKKLQEMDIHMNHLRCLCRLCGT
ALRKVKGPVHDVHGDLDEVSKGSLRRMGCKFTSWPGVLLKVFKVDVTEDTESVHPLSFCH
RCWVVAIRGGGFCSFSRTRVPEWKPHSHTCHLCSPRKPSFQRTRRKRRKAIPRAQSLAKR
ARWDNGDSIAVGEKRVLRPFGDPHHGPVLKAWRNPRIQREQWVRNITHCQKDHLNTKLIS
EKLPVDFLFSFTCLVCDHLLSDPVQSPCGHLFCHSCIIKYIHVLGPLCPACNLTCAPNDL
TSPAKAFLSALHSLPLLCPCGKQVRVDSFKAHCQSHELDEQDGKQQTSKLDSYLLTNKGG
RPRQHLLSLTRRAQKHRLRDMKNQLKAFADKEEGGDLKSVCQTLFLLALRSGNEHRQADE
LEAIMQGRGFGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAAEKEL
LPGFLEFEWQPALKNVSTSCNVGIINGLSGWTSSVDDFPADTITRRFRYDVALVSALKDL
EEDIMEGLREAGMEDSACTSGFSVKIKESCDGMGDVSEKHGGGPAVPEKAVRFSFTVMSV
SVKPDNEEKEVTIFTEPKPNSELSCKPLCLMFVDESDHETLTAILGPVVAERKAMKGSRL
ILSLGGLARSFRFHFRGTGYDEKMVREMEGLEASGSTYVCTLCDSTRAEASENMVLHSVT
RSHVENLDRYEIWRTNPFSESVDELRDRVKGVSAKPFMEMHPTLDALHCDIGNATEFYKI
FQDEIGEVYKKVNPSREERRSWRAALDKQLRKKLKVKPVMRMNGNYARRLMTQEAVDVVC
ELVPSEERREALRELMSIYVQMKPVWRATCPAKECPDQLCRFSFNSQRFADILSSTFKYR
YNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKAFELEDV
LKHHWLYTSKYLQKFMEAHKDSSKALKATINPVESQDYEDMSLGILKV
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggagagtctggagacagatggccccagatcctccatgccggctgagctccac
catccccactccaagtactctcagtggaagtttaaactgtttaggctcaagtcaatggag
aaggcccctctgcccagtgactctcagcctgagaaaggagccgtgttagggatctcacct
cctgcagctctgaatacagagttagataatgacatatgcccagggagtgtcatgaaatta
tgcctaggaggaaaaagcaaggaaaatgtagagggccctggctggcgggtggacaagaag
ctacaggaaatggacatccacatgaaccacctcaggtgcttgtgccgtctttgcggaacg
gccctgagaaaagtcaaaggaccggtgcacgatgttcatggggatctggatgaggtcagc
aaaggttcccttcgtagaatgggctgcaagttcacaagctggccaggtgtacttctcaaa
gtcttcaaagtggatgtgacagaggacacagaatctgtccaccctctttccttctgccat
cgctgctgggtggtcgccatacgaggagggggcttctgcagcttctctagaacgagagtc
cccgagtggaaacctcactctcacacctgtcatctttgctcacccagaaaaccttcattc
cagcggactaggaggaagaggcgaaaagccattcccagagcccaaagtctggcaaaaaga
gccaggtgggataatggagacagcattgctgttggtgagaagagggttctgagaccattt
ggagaccctcatcatggccctgtgctcaaggcatggaggaatccccgcatccagagagag
caatgggtcagaaacatcacccactgccagaaagaccacctgaacaccaagctgatctct
gagaagctccctgtagacttcctcttttctttcacctgcctggtgtgtgaccacctgctc
tctgatccagtccagtccccctgtgggcacctgttctgccacagctgtattattaaatac
atccacgttctggggcctctctgcccagcctgcaacttgacgtgtgcccccaatgatctg
acctcgcctgccaaagccttcttatcagccttacactccctgcctctgctctgcccctgt
ggcaagcaggtacgggttgactcatttaaagcccattgtcagagccatgagctggatgaa
caggatggaaaacagcagacatccaaacttgacagctacctgctcaccaataaaggtgga
agaccccgtcagcacctgctatcgctaacacgtcgggcccagaagcatcggctgagggat
atgaagaaccagctgaaggcatttgcagataaagaggaaggtggtgacctgaagtctgtg
tgccagactctgtttctgcttgcactgaggtctgggaatgaacaccgacaggcagacgag
ctagaggccataatgcaaggcagagggtttgggctgcatcctgctgtgtgcttggccatt
cgggtcaacaccttcctgagctgcagccagtatcacaagatgtaccggactgtcaaagcc
accagtggccgccagatctttcagccgctgcacaccctgcgagctgcagagaaggagctt
ctccctggcttcctcgagtttgaatggcagccagctctcaagaatgtgtctacatcttgc
aatgttggcattattaacgggctctctggatggacttcctcggtggatgacttcccagct
gacaccatcactcgccggtttcgctacgatgtggctctggtgtcagcattaaaggatctg
gaggaggacatcatggagggtctcagagaggctggtatggaagacagtgcttgtacctca
ggcttcagtgtcaagatcaaagaatcctgtgatggcatgggcgatgtcagtgagaaacat
ggcgggggaccagctgtccctgagaaggctgtacgtttttcttttactgtcatgtctgtc
tctgtcaagccagacaacgaggagaaggaagttaccattttcactgagcccaagccaaac
tcagaactgtcatgtaagcccctttgcctgatgtttgtggatgagtcagaccatgagaca
ctcacagctatcctggggcctgtagttgccgagcgtaaggcaatgaaggggagcaggctc
atcctatccttgggtggactagctcgctccttccgattccacttcagaggtacaggatac
gatgagaagatggtgcgtgagatggagggccttgaagcctctgggtccacctatgtctgc
actctctgtgactccacccgggcagaggcctctgaaaacatggtgctccactcggtcacc
cgcagtcatgtagagaacttggatcgctacgagatatggagaaccaacccattttccgag
tctgtagacgagctgcgggacagagtcaaaggtgtctccgccaagccgttcatggagatg
caccccacgctggatgcgctacactgtgacattggcaatgccacagagttctacaaaatc
ttccaggacgagatcggggaggtgtacaaaaaggtcaaccccagtcgggaggagcggcgc
agctggagggcagccctggataaacagctgaggaaaaagctgaaggtcaaaccggtcatg
aggatgaatgggaactatgcccgcaggctaatgacccaggaggctgtggatgtggtgtgt
gagctggtgccctcagaggagcggagggaagccctgagggagcttatgagtatctacgtc
cagatgaagcccgtgtggcgtgccacctgccctgccaaggagtgccccgaccagctgtgc
cgcttcagctttaactcacagcgctttgcagacattctctcttctaccttcaaatataga
tacaatggaaagataaccaattatttgcacaagaccctggcccatgtgcctgaaatcata
gagagagatggatccataggagcctgggccagcgaagggaacgagtcggcaaacaaactg
ttcaggcgtttccgtaaaatgaatgctcgtcagtcaaaggcctttgaacttgaggacgtg
ttgaaacatcactggctgtacacttccaaatacttgcagaagttcatggaagctcacaag
gactcttccaaagctctgaaagccaccattaacccagtagagagccaggattatgaggac
atgtctctgggcattcttaaagtttga
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