Pseudochaenichthys georgianus (South Georgia icefish): 117447747
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Entry
117447747 CDS
T09629
Name
(RefSeq) unconventional myosin-Va-like isoform X1
KO
K10357
myosin V
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117447747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117447747
04131 Membrane trafficking [BR:
pgeo04131
]
117447747
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117447747
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117447747
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117447747
mRNA cycle factors
P-body specific factors
117447747
Membrane trafficking [BR:
pgeo04131
]
Others
Actin-binding proteins
Myosins
117447747
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117447747
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117447747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
MYO6_lever
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
117447747
NCBI-ProteinID:
XP_033940508
LinkDB
All DBs
Position
6:complement(31551479..31569433)
Genome browser
AA seq
1821 aa
AA seq
DB search
MAASELYAKYARVWLPDAGEVWKSAELIKDYTPGDLKLALQLEDGTEVEHKINPKTNDLP
PLRNPNILVGENDLTALSYLHEPAVLHNLKVRFIDSKTIYTYCGIVLVAINPYESLPIYE
EDIINAYCGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSCSSGEANIEERVLASNPIMEALGNAKTTRNDNSSRFGKYIEIGFDKKHRIIGANMR
TYLLEKSRVVFQAQEERNYHIFYQLCASAHFPEFKAFQLGCADDFHFTNQGQSPVIDGMD
DAKGMSKTRRAFSRLGISESDQMSIYQILAAILHLSNVEVKDQSADKSSILLDNVHLMVF
CELMGVPSEEMAHWLCHWKLKTTTETYVKSVSKMNAVNGRDALAKHIYARIFSWIVGSIN
NALRSTAKQHSFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
EIPWTLIDFDDNQPCIDLIEAKLGVLDLLDEECKMPKGSDDSWAQKLYNTLLKQNAHFDK
PRLSNRAFIILHFADKVEYQCEGFLEKNKDTVNAEHINVLKKSQVDWLRKLFEDDQKATS
STKKRSGVSGRAGPTPRDNKKTVGLQFRQSLQLLMDTLNATTPHYVRCIKPNDDKSPFIM
DPVRAVQQLRACGILETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCRNLLE
KLIKDQEKYQFGKNKIFFRAGQVAYLEKLRFDKLRNACVRIQKTIRCWLARKKYLRMKQS
ALTIQRHVRGHQARCYVKFLRRTRAAVVIQRNVRMWATRRSYQQQRSAAITIQCILRAYM
ARKQYFKLMYEQKAVIIQKWVKGWLVRRRYRRALAAIVLLQSCVRRLRAKKELKKLKVEA
RSVERIKKLNSGMENKIMQLQHKINEQQKENRELSERLTVMQKTQTTEREKQSRDIENLR
RSEQEAKSKAATLPSLLEQLSFLQHQLEDTSRENTQLTEQTQVYKEHTQQMVEDLNRKNT
LLSSEKDELNQILLEQTNQLTEIKTNVENADQLEKDLTEERSRYQSLLSEHLDLEERHRD
LTEELDLNIQSSSKCSHTRTDSNYSSNSSGFGQSLGSTEGEDSPITPEETPAAVDLPVLL
KFQRRVKELEQEKHSLWQQLDKGEEAQQEKAKEVEVQRTVGRAELDLETLKRQELESDNK
KLKQDLNELRNSLTNENSDLAPPAAGSMSYNILLEQLTSSNEELDMRKEEVLLLRSHMVR
QEALKYKDSALGERVNLDLNDVPSFQDVDRSTDIHTLNEDGELWLAYEGLKETNRIVECQ
MQLQHRVHNEENRKLQEEVSRLKVEKEQQQRLLVQSLLLPEGARIDASLKHEITRLTDEN
LELMKKQQQQNQTMRQLKRDLKCYIQKVEDVEASSQQKSKTAVMTAPVRAVNITRKEKEY
RGMLEYRGGDESRLLKNLVSDLKPRGVAVNFIPGLPAYIIFMCVRYADNVNDDQRVSTLL
NSTISSIKGVIKRKGHDFERVSFWLANTCRLMHCLKQYSGDEVFITHNTPKQNEQCLANF
ELSEYQQVFGDLAIQIYRQLIKCTENNLQPLIVASMLEHETIQGILGSKPTGLRKRSSSS
SEAAVTVEVLLQRLGLFYTTMCQHGMDLELIKQLVKQQFYIICAVTLNNLLLRKEMCSWS
KGLQIRYNVWQLEEWLAEREMADCGAKETLEPLVQAAQLLQIKKKTEEDAQAISVMCTAL
TTAQIVKLLTLYTPVIEFEERVSSTFLTTLNNLLKDRDESSTLMMDAKKIFSVSLPFTPS
SVALETIQIPASLNLGFLARI
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctctgaactttacgcgaagtatgcccgtgtgtggctgccagatgcaggagaa
gtgtggaagtcagcagagcttatcaaagattacactcctggcgacctgaagctggctctg
cagctggaggatggcacggaggtggaacacaaaataaatcccaaaaccaatgacctgcca
ccactgagaaaccctaacatcctggtgggcgaaaatgacctcacagctctcagctacctg
catgagcctgcagtgctacacaacctcaaagtgcgctttatcgactccaagacgatttac
acatactgtggaatcgtcctcgttgccatcaatccgtatgagagccttcccatctatgaa
gaggacatcatcaatgcctactgtgggcagaacatgggagacatggacccccatatattt
gcagtggcagaggaagcatacaaacagatggccagagatgaaagaaaccagtccatcata
gtgagtggtgagtctggagctggcaaaactgtctctgctaagtatgctatgcgctacttt
gccacagtcagctgctcttcgggcgaggcaaacattgaggagagagtcctagcctccaac
cctatcatggaggctcttgggaatgccaagacaacaaggaatgacaacagcagtcgcttt
gggaagtacattgagattgggtttgacaagaagcatcgcattattggggccaacatgaga
acctacttactggagaagtctagagttgtgtttcaggcccaagaagagcggaactaccat
atcttctaccagctgtgcgcctctgcacattttcccgagttcaaagccttccagttaggt
tgtgcagacgacttccacttcactaaccagggccagagcccagtcattgatggaatggat
gatgccaaaggcatgagtaaaaccaggagggctttctcacggttaggaatcagtgaaagt
gatcaaatgtcaatttaccaaattctggctgctattctccatcttagcaatgtggaggtg
aaggatcagtcggcagacaaaagcagcatcttgctggacaatgtccacctgatggtgttt
tgtgagttgatgggggtgcccagtgaagagatggcccactggttatgtcactggaaactc
aagacgaccacagaaacatatgtgaagtctgtctccaaaatgaatgcggtgaatggccga
gatgccctcgccaaacacatctatgccagaatcttcagctggattgtgggcagtattaac
aatgccttgaggtctacagcaaaacaacactccttcatcggtgtgctcgacatttacggg
tttgaaacgtttgatatcaacagctttgaacagttctgcatcaattatgccaacgagaag
cttcaacaacagttcaacctgcatgtcttcaaactggagcaagaggagtacatgaaagag
gagatcccttggacactgattgactttgacgacaaccagccctgtattgatctcattgag
gcaaagctgggtgttctggacctcctggatgaagagtgcaagatgcccaaaggctctgac
gactcatgggcccagaaactgtacaacacactcctgaagcagaatgctcactttgataaa
cccaggttatcaaaccgagctttcatcatcctccactttgcagacaaggtggagtaccaa
tgtgagggtttcctggagaaaaacaaggacacggtcaacgcggagcatatcaatgtgctg
aaaaagagccaggttgactggctgcggaagctgtttgaggatgaccagaaggcaacaagt
tcaacaaagaagcgaagtggtgtctctggaagagctggtccgactccgagggataacaag
aagaccgttggactgcagtttcggcagtctcttcaactgctgatggacacactaaatgcc
acgactcctcactatgtgcgctgcatcaagcctaatgacgacaaatctccattcatcatg
gaccctgtgagggccgttcagcagcttcgggcatgtggcatcctcgaaacaatccggata
tcagcagcaggcttcccatcgagatggacctatcaggaattctttagtcgttatcgggtc
ctgatgaagcaaaaggatgtgctctctgacagaaaacaaacctgcagaaatctcctggaa
aaactaataaaggaccaagagaagtatcagtttggcaaaaacaagatcttcttccgggct
ggtcaggtggcgtacctggagaagcttcgttttgacaagctacgtaatgcttgtgttcgc
atccagaagactatccgctgctggctcgctcgcaaaaagtacctgaggatgaagcaatct
gctctgaccatacagagacatgtccggggtcaccaggcacgctgttatgtgaagtttttg
cgaagaaccagagcagctgttgtcattcagcgtaatgtgcgtatgtgggcgaccaggaga
agctaccagcagcagcgctctgcagccatcactattcagtgcatcttgagggcctacatg
gctaggaagcagtactttaagttgatgtatgaacaaaaagcggttatcatccagaaatgg
gtgaaaggctggctggttagacggcgttaccgacgtgccctggcagccatcgtgctgctg
cagagctgtgtgcgtcgcctgagggccaagaaggagttaaagaagctgaaggtggaggcc
cgctctgtggagcgcatcaagaagctcaacagtggcatggagaataagattatgcagttg
cagcacaagataaacgagcagcaaaaagaaaacagagagctcagtgagaggctgactgtt
atgcagaagactcagaccactgagagagagaagcagagcagagacattgaaaacctacgc
agatcagagcaggaggccaaaagcaaggcagcgacgcttccctcgctcctggagcagctc
tccttcctccagcaccagctggaagacacaagcagagagaacacacagctcacagagcag
acccaggtctacaaggagcacacacaacagatggtagaagaccttaataggaagaacact
ctgttgagcagcgagaaagatgaactgaaccaaatactcctggaacaaaccaatcagcta
acagaaatcaaaaccaacgtcgagaatgcagaccagctggagaaggacttgactgaagag
cgctctcgctaccaaagtcttctgagcgaacacctggatctggaagagcggcaccgagac
ctgacggaggagctggacctcaacattcagagttcgagcaaatgtagtcacaccaggaca
gactccaactacagcagcaactcatctgggttcggtcagagcttaggctccactgaggga
gaggacagcccaatcacaccagaggagaccccggcagcggtagacttgccggtcctgctg
aagttccagagaagagtgaaggaactggagcaggaaaagcactctctgtggcagcagctg
gacaagggagaagaagcccagcaagaaaaggccaaagaggtggaggtgcagagaactgtt
ggccgagcagaactggatttggaaacactaaagcggcaagaactggagtctgacaacaag
aagttgaagcaggatctgaatgagctgcggaattctctgaccaatgagaacagtgatctg
gcgccccctgctgctggctctatgtcctacaacatcctgctggaacaactcacttcttcc
aatgaggagctggatatgcgaaaagaggaagtgctgctcctccgctcacatatggtccgc
caagaagctctcaaatacaaggactctgcgctcggggaaagggtgaatttggatctcaat
gacgttccctcatttcaagatgtggacaggtccactgacatccacacactgaatgaagat
ggggagctgtggctggcttatgaaggcttgaaagagaccaataggatcgtggagtgccag
atgcagctgcagcaccgtgttcacaacgaggagaacaggaagctgcaggaggaggtgagc
aggttgaaggttgaaaaggagcaacagcagaggctgctggtccagagcctcctcctgcct
gaaggcgcccgtatcgatgccagtctgaagcacgagatcacacggctcaccgatgagaac
ctggaactcatgaagaagcaacagcaacagaaccaaaccatgcgccagctgaaaagagat
ctcaaatgttatattcaaaaagttgaagatgttgaagcgagttcacagcaaaagagtaag
accgccgtgatgactgctcctgtccgagcggtgaatatcacccgcaaggagaaagagtac
cggggcatgttggagtacagggggggcgacgagagccgcctgctcaagaatctggtctca
gacctgaagccacgtggcgtagcggtcaacttcattcctggccttccggcttacatcatc
ttcatgtgcgtgcgatatgcagacaatgtgaatgacgatcagagagtcagcacgctgctc
aattccaccatcagcagcatcaagggggtcataaagaggaaaggacatgattttgaaagg
gtgtctttctggctggccaacacatgccgattaatgcactgtctgaagcagtacagtgga
gacgaggtgttcataacacacaacactcctaagcagaatgagcagtgcctcgccaacttt
gagctgtcggagtaccagcaggtctttggtgatctagctatccaaatctaccggcagctc
atcaaatgcacagagaacaacctgcagcccctgatcgtggctagcatgctggagcacgaa
actatccaaggtattctgggctccaaacccaccggcctgaggaagaggagcagcagttcc
tcagaggcggctgtaaccgtggaggtcctgctgcagcgcctcggcctcttctacaccacc
atgtgtcagcacgggatggacttggagctcatcaaacagctggtcaagcagcagttctac
atcatctgtgcggtcacactcaacaacctgctgctgcggaaggaaatgtgctcctggagt
aaaggcctgcagatcaggtacaatgtctggcagttagaggagtggctggcggagcgggag
atggccgactgcggagccaaggagactctggagccgctggttcaggctgctcagctcctc
cagatcaagaagaagacggaggaggacgcccaggctatctctgtcatgtgcaccgcgctc
accacagcacagattgtaaaactgctgaccttgtacactccagtgattgagtttgaagag
cgagtgtcatccacgttcctcacaactcttaacaaccttttgaaagacagagacgagtcg
tccactttgatgatggacgccaagaagatcttctccgtctccctccccttcactccctcc
tctgtggctctggagaccatccagatccccgccagcctcaatctgggcttcctcgcccgc
atctag
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integrated database retrieval system
