Pseudochaenichthys georgianus (South Georgia icefish): 117447763
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Entry
117447763 CDS
T09629
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03022
Basal transcription factors
pgeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117447763 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
117447763 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117447763 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117447763 (gtf2h1)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117447763 (gtf2h1)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117447763 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
117447763
NCBI-ProteinID:
XP_033940539
LinkDB
All DBs
Position
6:complement(31101502..31111747)
Genome browser
AA seq
548 aa
AA seq
DB search
MASLSEEVLLVLKKVRQRKQDGTLYLMAERIAWGPEGKDRFSVSHLYADIRCQKISPDGK
SKIQLQLVLHTGDSTAFHFSNDSTALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISTDEFWANRLGDTNNSDSSLSNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYNENVPHELTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECGKQDEIGLKSMVVQGVKNPLVDLLSLEDKTLDEGYGVCTTMPSTSNRTVKDSSN
SAIIKRFNHHSAMVLAAGLGKGETAGDPASETSCTDGNSRDSDLFQPPVKKVKLQEAIEY
EDLKKEKKPKTIALNLKKSDRYAHGPVPLQSQHYSTSQDIINSLNYIRHEMVNYKPNLTQ
VLCSTTASSAIAALSPGGVLMQAATQQAINQMVPTDVQGELKHLYAAAGELLRHFWSCFP
VNTQFLEEKVTKMKSNLERFQVSKLCPFQEKVQRQYLSANLTGHLEQMLQTAYSKFHVWQ
TRRMLRKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcatccctatcagaggaggtgctgctggtgctgaaaaaggttcgccagaggaagcag
gatggcacactttatctgatggctgagcgtatagcctggggtccagagggcaaggaccgc
ttctcagtcagccacttatatgcagatattcgctgtcagaaaatcagcccggacggtaaa
tccaaaattcagctgcagctggtgcttcacaccggcgacagtaccgcattccacttttcc
aatgacagcactgcactcaaagacagagacgctgccaaggagctgctgcagcagctgctg
cccaagttcaagaagaaagccaacaaggaactggaggagaaaaacaggatgcttcaggaa
gatcctgtgcttttccagttgtataaagatctggtggtgagccaggtgatcagtacagat
gagttctgggccaaccggctaggagacacgaacaactcggactcctctttatccaacaac
aaacaggaagttggtatatctggagcttttttggctgacattagacctcagactgatggc
tgcaatggcttgagatataatttgactgctgacattattgaatctatcttcagaacatac
cctgcagtgaagcagaagtataatgaaaatgtgcctcacgagctgacggagaaggagttc
tggacccgctttttccagtcccattattttcacagagaccgcatcaacacaggaacacag
gacatattctcagagtgtggcaagcaggatgaaatagggttaaagtccatggtggttcaa
ggagtgaagaatcctttagtggacctcctgtcgttagaagataaaacattagatgagggt
tacggagtttgcacaacaatgccctcaacttccaacaggacggtgaaggacagcagcaac
tctgccattataaagcggttcaaccatcacagtgccatggtgctggcagcaggcttaggc
aagggggaaacagcaggtgacccagctagtgagacgagctgcacagacggaaactcaagg
gactctgacctcttccagcctcctgtaaagaaggttaaattgcaggaggccatagaatat
gaagatcttaaaaaggaaaagaagccaaaaacaattgcattaaacctcaaaaagtctgac
aggtatgctcacggtcctgtgccacttcagtcccaacactattcgacaagccaggatatc
atcaactctctcaactacatccggcatgagatggtcaattataaacccaacctcactcag
gtgttgtgcagcacaacggctagttctgccattgctgcactttctccaggtggcgtgctc
atgcaggcagcaacacagcaggccatcaatcagatggtacccactgatgttcaaggagag
ctgaagcatctgtatgcagctgctggagagttgctgagacacttctggtcctgttttcct
gtaaacacacagtttttagaggaaaaggtgacaaaaatgaagtcaaacctggagagattt
caggtgtccaagctttgtccttttcaggagaaggttcagcgtcagtacttaagtgcaaat
ctcacaggacatttggagcagatgttgcagacagcctatagcaagttccacgtctggcaa
acccgtcgcatgctgaggaaaacctga
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