Pseudochaenichthys georgianus (South Georgia icefish): 117447803
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Entry
117447803 CDS
T09629
Symbol
lrp5
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04150
mTOR signaling pathway
pgeo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117447803 (lrp5)
04150 mTOR signaling pathway
117447803 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117447803 (lrp5)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117447803 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117447803
NCBI-ProteinID:
XP_033940586
LinkDB
All DBs
Position
6:6146504..6245038
Genome browser
AA seq
1644 aa
AA seq
DB search
MDLTRRGLEMGGLMLLLWSCLLSAVDGSPLLLFANRRDVRLVDAEGVRGESAIVVSDLED
AAAVDFLYSEGLIFWTDVSEEAIKQTHWNQSSNSLKEALGTGQTVVVSGLDSPDGLACDW
LGRKLYWTDSETNRIEVANLDGTSRKVLFWMDLDQPRAIALNPAQRYMYWTDWGEEPRIE
RAGMDGSNRKVIVVTEIYWPNGLTIDLVEQKLYWADAKLSFIHRANLDGSARETVVEGTL
THPFALTLSEETLYWTDWQTRSIHACNKNSGDKTREILSGIYSPMDIQVLEAYRQPNIRT
PCSDSNGGCSHLCLLSPVQPFYSCACPTGVQLKPDGKTCKPGAEQVLLLARRTDLRRISL
DLPDFTDIVLQVDDIRHAIAIDYDPVEGYVYWTDDEVRAIRRSNIDGSNAMMLVTTEINH
PDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPVNGFMYWTD
WGEHPKIERAHLDGTERLVLLNSSLGWPNGLAIDHAAGKLYWGDAKTDKIEVINVDGSNR
HILLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKVTAVREIIIDQLPDLMGLKATKVT
ETFGTNGCAEDNGGCSHLCFWCRHAVNCACPMGMELLSDLQTCVVPEAFLLFTNRDNIRS
ISLGTNSNDVAIPLTGVKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIEFGL
DYPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALDPA
NGFMYWTEWGGRPRIARAYMDGSTITTLVDKVGRANGLTIDYVDHRLYWTDLDTCMIEST
NMQGLQREIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVVLQGQLELML
DILVFHSSRQEGTNECSHNNGNCAHLCLATPAGAQCRCASHYTLNPDGRNCSSPSSFLLF
SQKASISRMVLGEQSPDIILPIHVLRNVRAVSYDPLDRLVYWLDGRQNIRRARDDGAMSS
MIVSSSVQPADNQLHDLSLDPYSRHIYWTCETTNTINVQRMDGHTVGVVLKDDTDKPRAI
VVNAEKGYMYFTTVQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKMGKLFWVDAD
LKRIESSDLTGANRIVLQDSNILQPTGVTVLGDHVYWIDRQQQMIERVDKLTGDGRTRIQ
GRISYLTSIHAVEEMDPQEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQDLLH
CGEPPTCSTEQFTCSTGEIDCIPMAWRCDGFPECDDSSDEESCPVCSSHQFQCDKGGCID
AQRRCNGEPDCADHSDEQDCETICPPNQFRCGDNQCITKKQQCDNYSDCPDGSDELACEY
VSPPSVPNTGPNTIGPVIAIILLVFVIGGAYFVCQRVVCRRYKGPSGTFPHEYISGTPHV
PLNFIAPSSSQHGTFQAISCGKSMMSSASLMGSSSSGAPLYDRNHVTGASSSSSSSTKGA
FYPQILNPPPSPATDRSLYNTEIFYSSNSPSTTRSYRPYHPVRGAAPPTTPCSTDVCDSD
YTPHHPPAGLASSAGRWKAAGHGAHGKHNKYYMDLNSDSDPYPPPPTPRSQYLSAEESCP
PSPSTERSYFHLCPPPPSPCTDSS
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggatttaacgcgaaggggacttgaaatgggcggtctgatgctgctgctgtggagctgc
ctgctgtcggcggttgacggctcacctctcctcctgtttgccaaccggcgtgacgtgcga
ttggtcgatgcggagggcgtgcggggtgagtcggccatcgttgttagtgacctcgaggat
gcagcagcggtggacttcctgtattccgagggcctgatattttggacagatgtcagtgaa
gaggccatcaaacagacgcactggaatcagtcatcaaactccctcaaagaggctctggga
actgggcagactgtggtggtgtcggggctggacagtcctgatgggctggcctgcgactgg
ttgggtagaaagctctattggacagactcggagaccaatcgtatcgaagtggccaacctg
gacggcacctcaaggaaggtcctgttctggatggacttggaccagcccagggcaatcgct
ctgaaccccgctcaacggtacatgtattggacagactggggagaggagccgaggatagag
cgagccggaatggacggcagcaacaggaaagtgattgtggtgacggagatatactggccc
aacggtctgaccatagacctggtggaacagaagctgtactgggcagacgctaaactcagc
ttcattcacagagccaacttggacggatctgcacgtgagactgtggtggagggcaccctg
acccacccgtttgccctgacgctgtctgaggagaccttatactggaccgactggcagacc
cgctccatccacgcctgcaacaaaaacagtggagataaaactagagagatcctcagtggg
atctactctccgatggacatccaggtcctggaggcctaccggcagcccaacatccggacc
ccctgcagtgacagtaatggaggctgcagtcacctctgcctgctctcgccagtgcagcct
ttctacagctgtgcctgccctactggagtccagcttaaaccagatgggaagacatgcaaa
ccaggagcagagcaggttctgctgctggctcgaaggacggacctccggaggatctcactg
gacctgcccgacttcactgacatagtgctacaggtcgatgacattcgccatgccatagct
atcgactatgacccagttgagggttacgtctattggacggacgatgaggttcgggccatc
cgccgatccaacattgacggcagcaatgccatgatgctggttaccacggagatcaaccac
ccagatggcattgctgttgactgggtggccagaaacctgtactggactgacaccggcact
gaccggatcgaggtaaccaggctgaatggaacgtctcggaaaattctgatttctgagaat
ctagatgaacccagagccatcgtcctggaccccgtcaatggctttatgtactggacggac
tggggagaacatcctaagatcgagcgggcccacctggatggaacggagcggctggttctg
cttaacagctctctgggctggcccaatggactggctatagatcacgctgcaggaaagctc
tactggggagatgcaaaaactgacaagatagaggtgatcaatgtggacggcagtaacaga
catattctgctggaggacaagctgcctcacatctttggttttactctgctgggcgactac
atctactggactgactggcagaggcgcagcatcgagagggtgcacaaagtcacggctgtg
cgggagatcatcatcgatcagctgccagacttaatgggcctgaaggccacaaaagtgacg
gagacctttggtacgaatggctgtgcggaggataacggcgggtgcagccacctgtgtttc
tggtgtcggcatgcggtcaactgtgcctgtcccatggggatggagctgctgtcagacctg
cagacctgcgtggtgccggaggccttcctgctcttcaccaacagggacaacatcaggagt
atctctttgggtactaacagcaacgacgtggccatccctctgacgggagtgaaagaggcc
tctgctctggactttgacgtctctgagaggagaatctactggacggacatacaggccaag
actatcagcagagcgtacatgaatggcagctctgtcgaacatgtcatagagttcgggctg
gattacccagaaggcatggcggttgactggatgggtcgtaacatctactgggctgacact
ggcactaaccgcatcgaggtggcccggctggacggacagtatcggcaggttctggtctgt
aaggacctggacaacccgcgctcgctggacaaccctcgctccctcgccctggacccagcc
aacggcttcatgtactggacggagtgggggggtcggcctcggatagccagagcctacatg
gacggcagcaccatcacaactctggtggacaaagtgggccgggccaacgggctcaccatc
gactatgtggaccatcgactgtactggaccgacctcgacacatgcatgatcgaaagcacc
aacatgcaagggcttcagagggagatcatcgtggacgacctgcctcaccccttcggcctc
acccagtaccgggactttatctactggaccgattttaacctgcgcagtatcgagcgggca
gacaaacgcagtggactcaaccgcactgtggtgctgcagggccagctggagctgatgctg
gacatcctggtgttccactcctcccgtcaggagggcaccaacgagtgttcccataacaac
ggtaactgtgcccatctctgcctggccacgcccgctggggcccagtgccgctgcgcctcc
cactacactctgaaccccgacggacggaactgcagctccccctccagtttcctgctcttc
agtcagaaggccagcatcagcaggatggtgttgggagagcagagtccggacatcatcctg
cccatccacgtgttgaggaacgtccgggcggtcagctacgaccctctggaccgcctggtg
tactggttggacggacgacagaacatacgcagggcccgggacgacggagccatgtcttcc
atgatcgtgagcagcagtgttcagccagcggacaaccagctccatgacctgagcctggac
ccctacagccgccacatctactggacctgtgagaccaccaacaccatcaacgtccagagg
atggacggccacacggtgggcgtggtcctgaaggatgacaccgacaaaccccgggccatc
gtggtcaacgctgagaaagggtacatgtatttcaccacggtgcaggaccgctcggctaag
atcgaaggagcctctctggacggcacggagagagagtctctgttcaccaccggactcatc
aggcccgtggctctggctctggacaacaaaatgggaaaactgttctgggtcgacgcagac
ctcaaacgcatcgagagcagcgacctgacaggagccaatcgcatcgtcctgcaggactcc
aacatcctgcagcccacgggggttactgtgctgggagaccacgtgtactggatcgaccgg
cagcagcagatgatcgagagggtggacaagctgaccggagacgggcgcacgcgcattcag
ggccgcatctcctacctgacctccatccatgctgtggaggagatggacccacaggagttt
gcatcccatccatgttctcgcgacaacggcggctgttctcacatctgcatcgctaaggga
gacggcaccccccgctgctcctgtcccatgcacctggtgttactgcaggacctgctgcac
tgtggagagccccccacctgctccacagagcagttcacctgctccacaggagagatcgac
tgcatccccatggcctggcgctgcgacggcttcccagagtgtgacgacagcagcgacgag
gagagctgccccgtctgctcctcccatcagttccagtgtgacaaaggaggctgcatcgac
gctcagaggcgctgcaacggggaacctgactgcgccgaccactctgatgagcaggactgt
gagaccatctgccctcctaaccagttccgctgcggagacaaccagtgcatcacgaagaag
cagcagtgtgacaactactccgactgccccgacggctccgacgagctcgcctgtgagtat
gtgtctcctccctccgtccctaacacagggcccaacaccatcggcccggtcatcgccatc
atcctgctggtctttgtaatcgggggagcctattttgtctgccagcgggtggtgtgtcga
cgctacaaaggtcccagtggaactttccctcatgagtacatcagtgggacgccccatgtg
ccactcaatttcatcgcacccagcagctcgcagcatggcaccttccaagctatttcctgt
gggaagtccatgatgagttcagccagcctgatgggcagcagcagcagcggagctcctctc
tacgacaggaaccatgtgaccggagcctcctccagcagctcctcctcaaccaagggagcc
ttctaccctcagatcctgaaccctcctccgtccccggccactgaccgctcactctacaac
acagagatcttctactcctccaacagtccttccaccaccagatcgtacagaccctaccac
ccagtccgtggtgcggccccccccaccaccccctgcagcacggacgtctgtgacagcgac
tacaccccccaccacccgccggccgggctggcgtcctcagcgggccgctggaaggccgcg
ggccacggcgcccacggcaaacacaacaagtactacatggacctaaactcggactcggac
ccctacccaccgccccccaccccccgctcccagtacctgtcagctgaggagagttgcccc
ccctccccttccactgagcgctcctacttccacctgtgccccccccctccctcaccctgc
accgactcctcgtga
DBGET
integrated database retrieval system
