Pseudochaenichthys georgianus (South Georgia icefish): 117447818
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Entry
117447818 CDS
T09629
Symbol
fbxl13
Name
(RefSeq) F-box and leucine-rich repeat protein 13 isoform X1
KO
K10279
dynein regulatory complex subunit 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117447818 (fbxl13)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117447818 (fbxl13)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117447818 (fbxl13)
Cilium and associated proteins [BR:
pgeo03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
117447818 (fbxl13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_EndoS
F-box-like
F-box
LRR_Zer-1
LRR_RPS2
LRR_At5g56370
LRR_8
Motif
Other DBs
NCBI-GeneID:
117447818
NCBI-ProteinID:
XP_033940605
LinkDB
All DBs
Position
6:24332817..24354903
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AA seq
811 aa
AA seq
DB search
MCQRHTMAGANAKPALNECVPKHCLPQIYKALLTASCLSCPNDPIQFLKNTLTAFQGHDS
LQDVDWHKFVADAEQLPATTTLTDRTSDCAYMEPDDIMMSLCLFEKAYCCYKNNLTSSCF
RKWKRFAAQSKRDIAELALKMDLEKKRHERNCQLVALAKWLNWVKLRKKTQAVASEKLES
LVNVGRLKRIIAAWRNVIKDSKRTKEYYKRLQMGFIEIGNKVNQTEEGCDILSMLPSNLS
LKIFRYLELRDWLNCAEVCSTWRAIIQSGTLWSQINFSVEKDWITEGKMKQILQNYRPFV
IHLNLRGCTTLKGPSLKCISECRNVQDLNLSECFNVTDVMVQRIVEGCPCLLYLNLSCTL
ITNKTLRELSRKCLNLQYLSLAYCYRFTDEGFLYLAKEKGCHNLIHLNLSGCTQMTVNGF
RYISAGCPSLKEIVVNDMPTLSDSCVLALTSRCHCLSAISLLDAPHLSDIALEAIAAVAK
LRTFRTEGNNQLTDNSWKALCCSSQGLRRLHAAECSRMTDASLKSVASLKNLHHLDISLC
NKVSDTGIQYLTEGSSSTKLRELNVSYCCHITDISVMMIAQRLCKLYHLNLSYCKSLTDM
SLEWLSGSSVCSLDISGCNIQDQGLAALEGIRLKKLNVAQCVYITDIGMEKLCKNVRDLE
HVDVSHCVALSDPAIRAISFYCSSLVTLRMSGCAKMTDLAVQYLTSGSQYLQELDVSGCV
LLTDRSLRHIERICPPLSSITMACCSSISKVAALKLQPRVKHWEHSNDDPPWFGYNIAEK
VHPITRPIKTDDTWEQVEQHSVMTRAASTER
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcaaagacacactatggctggggcaaacgcaaagcctgctctaaatgagtgcgtt
ccaaaacactgcctgccacaaatatataaggccttattgacagcttcatgcctgtcatgt
cccaatgaccctatacagttcctgaaaaacactctcacggccttccagggacatgacagt
cttcaggatgttgactggcacaaatttgtcgctgatgcagaacagctcccagcaacaacc
actctgaccgacaggacttcggactgtgcctatatggagccagatgacatcatgatgtcc
ctttgcctcttcgaaaaggcctactgctgttacaagaacaatttaacaagctcttgcttc
aggaagtggaagaggttcgctgcccagagtaagagagatattgcggagctggctttgaag
atggacctggaaaagaagcgtcatgaaagaaactgccagctggttgcacttgctaaatgg
ttaaactgggtaaaattacgcaagaagacacaggccgttgcctcggaaaaacttgagagt
cttgtcaacgttggtcgtcttaagcgcatcatagctgcatggcgtaatgttataaaggac
tcaaagaggacaaaagagtactataagaggttgcaaatgggatttatagaaattggcaac
aaagtcaaccagaccgaggaaggatgtgacatactctccatgctccctagcaacctctca
ctgaagatctttcgatatttagagttgcgagactggctaaattgtgctgaggtgtgttcc
acatggagagctatcatccagtcaggcacattgtggagtcagatcaacttctctgtggag
aaggactggataacagagggtaagatgaagcagattctgcagaactaccgtccatttgtg
atccatctcaacctgcgtggctgcacaactctaaaggggccaagcctgaaatgcatcagt
gaatgcagaaatgtccaagacctcaatctgtcagagtgttttaatgttaccgatgtgatg
gttcagagaattgtcgagggctgtccctgtctgctctacttgaacctttcttgcacatta
ataacaaacaaaactctaagagaactgtccaggaaatgtctaaaccttcaatacctgagc
ctggcctactgctacagattcacagatgaagggtttctgtacctggccaaagagaagggc
tgccacaatctcatccacctcaacctgtccggctgcactcagatgactgtaaatgggttc
agatacatttcagccggatgcccttcactcaaagagattgttgtcaatgacatgcccact
ctgtcagatagctgtgtattggctctcacttcgagatgtcactgtctatcggccatttcg
ctgctggatgctccccatctctccgacattgcgttagaagccatcgctgcagtcgctaag
ctgaggactttcaggacagagggtaacaaccaactcacagacaacagctggaaggctttg
tgctgcagctctcaaggcctccgcagactccacgctgcagaatgctccagaatgactgac
gccagcctcaaatctgtggccagcctcaagaacctgcaccacctggacatctcactttgt
aacaaggtgagtgatactggaatacagtatctgacagaaggctcttcatccaccaaactg
agagagctgaatgtcagttactgctgtcacatcactgacatatctgtcatgatgattgca
caaaggttgtgtaaactgtaccatctcaacttgagttattgtaagagtctgactgatatg
agtctggagtggctgagtggaagctctgtctgctctcttgatatcagcggttgcaacatc
caggatcagggcctggcagctcttgaaggaattcgcttgaagaagttaaatgttgcccag
tgtgtctatatcaccgatattggcatggagaagctgtgcaagaacgtgagagatctggaa
catgttgatgtgtctcactgtgtagctctgtcagacccggccatcagagccatttcattt
tactgcagcagtctagtcacgctgcggatgtcggggtgtgcgaagatgacagatttggca
gtgcagtatctgacaagtggatctcagtacctgcaagaacttgatgtgagtggctgcgtt
cttctcacggatcgcagtctccgacacatagagaggatctgtcctccactcagctccatc
actatggcctgctgcagcagcatctcaaaggtggccgccctaaagcttcagccacgtgta
aagcactgggagcacagcaatgatgaccctccatggtttggatacaacattgccgaaaaa
gtacatccaatcacaagacctatcaagacagatgacacctgggaacaggtggaacagcac
tcagtgatgacacgagcagcaagtacagagagataa
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