Pseudochaenichthys georgianus (South Georgia icefish): 117447826
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Entry
117447826 CDS
T09629
Name
(RefSeq) B-cadherin isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04371
Apelin signaling pathway
pgeo04514
Cell adhesion molecules
pgeo04520
Adherens junction
pgeo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117447826
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117447826
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117447826
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117447826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117447826
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117447826
04090 CD molecules [BR:
pgeo04090
]
117447826
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117447826
Cell adhesion molecules [BR:
pgeo04515
]
Cadherins
Major cadherins
117447826
CD molecules [BR:
pgeo04090
]
Proteins
117447826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
RibLong
BACON_2
TM_ErbB1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
117447826
NCBI-ProteinID:
XP_033940626
LinkDB
All DBs
Position
6:25467647..25473158
Genome browser
AA seq
811 aa
AA seq
DB search
MTNKGDLSLLFLLCQVQCFAFLAAAEMSPWCLNNRINSSNNEITRSAKLENNSEVVLEQL
PTIQFARVSGCLKRKKREWVIPAIHFPENERGSYPKLMVKIKSNNDDKVAITYRITGPGA
DHPPEGVFTVDRRSGVLYVTQPLDRESTAKYTLWAHALNEGVKAEEPMELIIHVIDQNDN
APAFTENPFYGRVSESANTGESVIKVVAVDKDDPQTNNAMVRYSIKAQMPTEDMFAINPV
SGVIRVNAGVLDRETQPEYKLLIQAADMEGEGLRTTCTVIITVTDSNDNAPQFTVTSLST
SVPENEAGVEVIRLKATDKDELGSPNANTIYSIIKGNERGDFNITTGSSQMEGIIKTAKE
LDFESVPVFTLLVVVTNEVPFSGRVSTSTATVTVAVVDKNEPPVFRPAEMYVSISEDEKT
GSSVADLKAKDEDTARKQSVRYKLHHDTARWLSIDKDSGSVQVKSNMDRESHYVTDSKYT
VLVLAYDNDTVPATGTGTLVVTLLDVNDHRPVIKQRRAILCNINPFPALLDIIDVDGPGH
AGPFTVELQGEHRINWTISTNSTNSVAALAPKLDLPPGDYSVQMRIYDVGMIYQDSTLDV
EVCQCQGAVSTCFIPRSAPHLHGSSLATSVLGTIFGLLLLLLLLLLLLKRRRRSEKDVPL
LEDVPRDHIFCYDEEGGGEEDREYDLSQLHRGLDDRPEVFCSDVFPAVQRPPSYRLQFHD
NEEIFHLIEDNVHAADSDPTAPPYDSLLVFDYEGVDSDAGSLSSVDSSDSDEEQDFQSLS
LWGPPFSMLADLYTGGVDDDTETLPGVTEWV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaaaggggatttaagtctgctctttttgctgtgccaagtccagtgttttgcc
tttctggctgcagcagaaatgtcgccatggtgcttaaacaacagaatcaactcctccaat
aatgaaatcacaagaagcgcaaagctagagaataactctgaagtggtcctggagcagctc
cccaccattcagtttgcacgtgtgtctggctgtttgaaacgtaagaagagagagtgggtt
attccagctattcactttccagaaaatgaaagggggtcataccccaaattgatggtgaag
atcaagtcaaacaatgatgacaaggtggcgataacctacagaatcacaggaccaggggct
gaccacccccccgagggtgtctttactgtcgaccggcgatctggggtgctgtatgtgacg
cagcccctggacagggagagtacagccaaatacactctgtgggcccatgcactgaatgag
ggtgtaaaggctgaggagcccatggagctcattatccacgttattgaccagaatgacaac
gcgccagcatttactgaaaaccctttctatggcagagtgagtgaaagcgcgaacaccggt
gagtctgtcataaaggttgtagcagtggataaagatgacccacagacaaacaatgctatg
gttagatacagtataaaggctcagatgcccacagaggacatgtttgccataaacccagtg
agtggggtgatcagggtaaacgcaggcgtactggacagagagactcagccagaatacaag
ctgctcattcaagcggctgatatggagggggaggggctaagaaccacctgcactgtcatc
attactgtcactgacagcaacgataatgctccacagttcaccgtcacatctttgtcaaca
tcagtccctgagaatgaggctggagtggaggttataagactaaaggccactgacaaggat
gagttaggatctccaaacgccaacaccatatactcaataatcaaaggcaatgagagggga
gactttaacatcaccacaggctccagtcaaatggagggaatcatcaaaacagccaaggag
ctggattttgagagcgttcctgtctttactctgctggtggtggtgaccaatgaggtgccg
ttttctggacgggtgtcaacctcgacagccacagtgactgttgcagtggtggacaaaaac
gagcctcctgttttcaggccagcagagatgtatgtaagcatctcagaggatgagaaaaca
gggagttctgtggctgacctcaaagcaaaggacgaagacacagctaggaaacagagtgtt
agatataaactacaccatgacactgccaggtggctgagtattgataaagactcaggatct
gtccaagttaaaagcaacatggacagagaatcacactacgtcacagacagcaaatacaca
gtcctagttttggcttacgacaatgataccgtcccagctacagggacaggtactctggtt
gtgactttattagatgtgaatgaccatcgtcctgtaatcaagcagaggagagccattctg
tgcaatattaacccttttcctgccctgctggatatcatagatgtggacggacctggtcat
gctgggccctttactgtggagcttcaaggagagcacagaatcaactggactatcagcacc
aattccacaaacagtgtggcagccttggctcccaaactggatttgccccctggagactat
agtgtgcagatgcgtatttatgatgtcggcatgatctaccaagacagcaccctggatgta
gaagtgtgccagtgtcaaggcgctgtctctacctgcttcatcccacgctctgcccctcat
ctgcacggctcatctctcgcaacatcagttctgggaacgattttcggtcttctgctgctg
ctcttgctgctgctgctgttgctgaaaagaaggaggaggtcagaaaaggatgttcctctc
cttgaagatgtacccagggaccacatcttctgctacgatgaggaggggggaggtgaagag
gaccgggagtatgacctgagtcagctccacagaggcctggatgatcgtcctgaagtcttc
tgctctgatgtgttccctgctgtccagagacccccatcctaccgcctacaattccacgac
aatgaagagattttccatttaattgaggataacgtgcatgctgccgacagcgaccccaca
gcccctccctatgactctctcctggtgttcgactacgagggtgtcgactcagatgcaggt
tcgctcagttcagtcgactcctcggactcggatgaggagcaggactttcagagcctgagc
ctgtgggggccgcctttcagcatgctggctgacctgtacacggggggggtggacgacgac
acagaaacactgccaggagtaacagaatgggtctga
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