KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117447841
Entry
117447841         CDS       T09629                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117447841
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pgeo01009]
    117447841
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgeo03021]
    117447841
Protein phosphatases and associated proteins [BR:pgeo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117447841
Transcription machinery [BR:pgeo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117447841
    Little elongation complex (LEC)
     117447841
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 117447841
NCBI-ProteinID: XP_033940656
LinkDB
Position
6:complement(28328724..28355560)
AA seq 600 aa
MAALRQEHRYGLSCGKINKNNPNQTLYHVKLTDTAIRTLEGYQNLKASLPSQPAICFKGS
QGYVKIPAPTPEAPDGFRVFSFYLSSDSKDKPQSSFDCIHQYVSGEGRDHLEGQGSIQDK
ITVCATDDSYQTTRERMSQVEKDIWSRSAIEIKPGPSKFVKVQRKQGLVSGSDGSNKHSP
SNKRSLVPSPVAHRPLRDRIIHLLALKPYRKPELLLWLERERASLKDKADLTSILEEVGK
LNPKDHSYTLKDELYRHVQRDWPGYVEEEKQLIHRLLIKWKLQPLHSIQLKSPQSNQSFH
KTPGDSPSHLSPAKNLSVKRPLPSDPSNFQTPKKQRLLDQCLPLQSPSHGDCVTNGARSS
SSHGNSRVQIKLDFDKTNNHLQGSPNGLHSPHKLSGSSTIPKLERTEPAPTVPSPNPPHT
DTSICTDQPFTNGQHKKKKSKKHKDKERERLKPDWIETSPDLKHNRENLKDHEGERTPVN
RTSAEELPEYLIKYSTIKALEQRQEYKDDFCAEYDEYRALHARIGAITEMFVQLGSKINT
LSPGTQEYKLMEDQILQKYRKYKKKFPGYREEKKRCEYLHQKLSHIKGLITDYDRAQGLS
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatgggctctcctgtggcaaaatcaacaaaaac
aacccaaatcaaactctatatcacgtcaaactcactgacactgccatcaggaccctcgaa
ggctaccagaacctgaaggcatcactaccaagtcagccggcgatttgcttcaaggggagc
caagggtatgtaaagatcccagcgccaacccctgaagctccagatggattcagagttttc
tcgttctacctttccagtgacagcaaagacaagcctcagtccagctttgactgcattcac
cagtatgtctcaggggagggcagggatcacctggagggccagggtagcattcaggacaag
atcaccgtttgtgccacagacgactcctaccagacgacccgggagcgcatgtctcaggtg
gagaaggacatctggagccgctcagcaattgagatcaagccagggccaagtaagtttgtg
aaggtccagaggaagcagggtctggtatcaggctcagatggcagcaacaagcactccccc
agcaacaagaggagcctggttcccagccctgtggcacaccggcccttgagggatcgcatc
attcatctcctggccttaaagccctacaggaaacctgagctgctactgtggttggagagg
gagcgggccagtctaaaggacaaggctgacctgacctcaatactggaggaggttggcaaa
ctgaaccctaaggaccacagctatactctgaaggatgagctctacagacatgttcagaga
gactggcctggatatgtagaagaggagaagcaactcatccacaggctcctgatcaagtgg
aaacttcagccactccacagtatccagttgaagagcccccagtccaaccagtcattccac
aaaactcccggggactctccttcacatctcagccctgccaagaatctctctgtgaaacgg
ccgttgccctcagacccatccaactttcagactcccaaaaaacaaagactgttagaccag
tgtctgccactgcagtcaccgtctcacggagactgcgtcaccaatggggctcgcagctcc
tctagtcatggaaactctagagtacagatcaaactggacttcgacaaaaccaacaatcat
ctccaggggagcccaaatggactgcactcaccgcacaaactcagcgggtcatctactatt
cccaaactggagaggacagagccagctcccactgtacccagccctaacccgccacacact
gacacgtccatttgcactgaccaaccattcaccaacggccagcataaaaaaaagaagtcc
aaaaagcacaaagacaaagaacgagagcgcttaaaaccagactggattgagacgagtcca
gacctgaaacataacagagaaaatctcaaagatcatgagggggagagaacacctgtcaat
cgaacctccgcagaggaactgcctgaatatttaataaaatacagtaccataaaagcactg
gagcagaggcaggagtataaggacgacttctgtgccgagtacgatgaatacagagctctt
catgcccggatcggggctatcacagagatgtttgttcagttgggctcaaagatcaacact
ctctccccgggaacacaagagtacaagctcatggaggaccaaatactacaaaagtaccga
aagtataagaaaaagtttcctgggtaccgggaagagaagaagcgatgcgagtacctccat
cagaaactgtcgcatatcaaaggcctgatcacagattatgaccgagcgcagggactctcc
tag

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