KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117447865
Entry
117447865         CDS       T09629                                 
Symbol
bicd1a
Name
(RefSeq) protein bicaudal D homolog 1 isoform X1
  KO
K18739  protein bicaudal D
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117447865 (bicd1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgeo03019]
    117447865 (bicd1a)
   04131 Membrane trafficking [BR:pgeo04131]
    117447865 (bicd1a)
Messenger RNA biogenesis [BR:pgeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     117447865 (bicd1a)
Membrane trafficking [BR:pgeo04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    117447865 (bicd1a)
SSDB
Motif
Pfam: BicD ApoO
Other DBs
NCBI-GeneID: 117447865
NCBI-ProteinID: XP_033940698
LinkDB
Position
6:complement(16117905..16176343)
AA seq 970 aa
MAADGVCGESVDQYRAELERLTQELAEANREKIRAAECGLVVLEENQTLKQKYADLEIEQ
ETLRKELEQLQEAFGQAYTNQRKVAEDGETNEETLLQESASKEAYYMGRLLVLQTNVTLS
RSVASNAQAENERLNALVQELRESNEMLELQRSRMREEVKEYKFRETRLLQDYTELEEEN
ITLQKLVSTLKQSQVEYEGLKHGIKVLEEETVLLNSQLEDALRLKDISQGQLEEALDALK
SEREQKNNLRKELAHHLSLSDSVYGAGAHLALTVTGVEGLKFPEETNITNGSAMPAANGN
NEDSNRRNGHVYAGTGLAKMNGEYRPGWKGEGLHPVPDLFSELNLSEIQKLKQQLLQVER
EKSALLMNLQESQTQLQHTQGALSEQNERVHRLMEHVSGMKCLNGEKELDDAQESEKPDG
GSSPPANGPRNPDIHGFEILECKYKVAVTEVIDLKAELKALKEKYNQAVEGQGEGHSDDR
AQALSEQEVTHLERSYRESRERISSLETELRTATSTASESQGMLNTAQDELVTFSEELAQ
LYHHVCLCNNETPNRVMLDYYRQSRITRSGSLKGSDDHRALLSPRLARRLAAASAACSSS
EPPRSPLDSPSKDAHHNEKTTNQGESTSCHSSPTRNPTGSPSISISPCPSPVPSEAGGDL
RKEPMNIYNLNPIIRDQIKHLQRAVDRSLQLSRQRAAARELAPMLDKDKELCMEEILKLK
SLLSTKREQIATLRLVLKANKQTAEGALANLKSKYENEKTMVTETMMKLRNELKALKEDA
ATFSSLRAMFATRCDEYVTQLDDMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEDLE
FDHEQTYRGRGAKVPRIKSSPPKVSLRGAFTAPSSPTRVQSPSLITTHTLNSSLTLTNPS
MSAWTSDTTLQPNLSYSYFSPSTPPIMVDPERLTLEFRRLLYSRQDLGRLSPYPRTRSPS
PVSPHIRRRR
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggccgcggatggagtatgcggggaatcggtggatcagtaccgggccgagttggagcgg
ctcacccaggaactggccgaggcgaaccgggagaagatccgggctgcggagtgcggtctg
gtggtgctggaggagaaccagacgctaaagcagaagtatgcagacctggagatcgagcag
gagactctcaggaaggagctggagcaactacaggaggcgttcggccaggcttacaccaac
cagcgtaaggtggcagaggatggggagaccaatgaggagacgttgctgcaggagtcagct
tcgaaggaggcctactacatgggccgtctcctggtgctgcagaccaatgtgacgctcagc
cgctctgtggcgtccaacgcccaggccgagaacgagaggctcaacgcactcgtgcaggaa
ctacgggagagtaacgagatgctggagctacagaggagccggatgagggaggaggtgaag
gagtacaagttcagagagaccaggctgcttcaggactacaccgagctggaggaggagaac
atcacgctgcagaaactggtatctacgctcaagcagagccaggtggagtatgaaggactg
aaacatgggatcaaagtcctcgaggaggagactgtcctcctcaacagtcagctggaagac
gcactacgtctgaaagacatttctcagggtcagttggaggaggccttagatgccctaaag
agtgagcgcgagcagaagaacaatctgaggaaggagctggcccaccacctcagcctgagt
gacagtgtctacggagcaggggcccacctggccctcaccgtcactggcgttgagggtctc
aagttccctgaggagaccaacatcaccaacggcagcgccatgcctgctgctaacggcaac
aacgaggacagcaatcgtcgcaatggtcatgtatacgcaggcaccggattggctaaaatg
aacggggagtacagaccgggctggaaaggagaaggcctgcacccggtgccggacctgttc
agtgaactcaacctgtctgagatacagaagctgaaacagcagctactacaggtggagcgt
gagaagtcggcgctgctcatgaacctgcaggagtcccagacccagctgcagcacacacag
ggcgcgctgagcgagcagaacgagcgcgtccaccgcctcatggaacacgtcagcggcatg
aaatgtctgaacggagaaaaagagctcgatgacgctcaggagagtgagaagcctgatggt
ggctcctcaccaccagctaatggcccccgtaaccccgatatccacggctttgagatcctg
gagtgtaagtacaaggtggcggtgacggaggtgatcgacctaaaagcggagctcaaggcc
ctgaaggagaagtacaaccaggctgtggaggggcagggagagggccacagtgacgacagg
gcccaggcactgagtgaacaggaggtaacccacttggagcgtagttatcgggaaagccgt
gagaggatttcgagcctggagacagagctacgaacagccacgagcacagcctccgagagc
cagggcatgctgaacacagcgcaggatgagctggttaccttcagtgaggaactggcgcag
ctctaccaccacgtctgtctgtgcaacaacgagacgcccaaccgcgtgatgctggactac
taccgccagagccgcatcacacgcagcggcagcctcaaaggctctgacgaccaccgggct
ttgctctctcctcgcctggctcgacgcctcgctgcagcatccgcagcctgctcttcctct
gagcctccacgcagccccctggactccccatccaaagatgcccatcacaatgagaaaaca
accaaccagggggagtctacatcctgtcatagcagccccactcgcaaccccacgggatct
ccatccatcagcatctctccctgcccatctccagtgccctctgaagcaggtggagacctg
cggaaggagcctatgaatatctacaacctgaaccccatcatcagagatcagatcaaacac
ctccagagggctgtggaccgctcgctgcagctgtccaggcagcgggctgcagcgagggag
ctggcgccaatgcttgacaaggacaaggagctgtgcatggaggagatactcaaactgaaa
tcgctgctcagtaccaagagagagcagatagccacactcaggctggtgctgaaggccaat
aagcagacagcagagggtgcactggcaaatttgaagagcaagtacgagaacgaaaagacg
atggtgacagagaccatgatgaagctcaggaacgagctgaaggctctaaaagaagacgct
gccaccttctcgtctctgagggcaatgtttgccacaagatgtgatgaatatgttacccag
ctggatgatatgcagaggcagctggcggcagcagaggatgagaaaaagacgctgaactcc
ctcctgcgcatggccatccagcagaaactggcattgacccaacggctggaggatctggag
ttcgaccacgagcagacttaccgtggccgcggcgctaaagtacccaggataaaaagcagc
ccgcccaaagtaagtctcagaggcgccttcacagctccctccagtcccacgagagtccaa
agcccctccttgatcaccacccacaccctgaactcctccctgacccttactaatccgtcc
atgtctgcgtggacttcagacacaactcttcaaccgaacctcagttactcttatttctct
ccgagcactccgcccatcatggtagaccctgagcggctaaccttagagttcagacgtctc
ctttattcaagacaagacttaggtcgtctgtcaccatatcccagaacccgtagcccttcc
ccagtatctcctcacatccgacgaaggcgatga

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