Pseudochaenichthys georgianus (South Georgia icefish): 117447880
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Entry
117447880 CDS
T09629
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03320
PPAR signaling pathway
pgeo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117447880 (pparab)
03320 PPAR signaling pathway
117447880 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117447880 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pgeo03310
]
117447880 (pparab)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117447880 (pparab)
Nuclear receptors [BR:
pgeo03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
117447880 (pparab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117447880
NCBI-ProteinID:
XP_033940729
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Position
6:complement(36022945..36059954)
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AA seq
469 aa
AA seq
DB search
MVDMESHYHPPSPLEDSVLGSPLCTDDDFLGGMEELQDISQSMDSNPLSSFDVPEYQSSS
NGSEGSTVLDALTPASSPSSVVYGVAAGQEDFSSSSSSLNLECRVCADRASGYHYGVHAC
EGCKGFFRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQS
EKLKLKAEMVTGDREVQDPQVADQKTLARQIYEAYLKNFNMNKAKARTILTGKTSTPPFV
IHDMETLQLAEQTLVAKMVGSAGPLKDKEAEVRIFHCCQCTSVETVTELTEFAKSVPGFS
SLDLNDQVTLLKYGVYEALFAMLASSMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPK
FQFAMKFNAMELDDSDLALFVAAIICCGDRPGLVNVTHIERMQESIVQVLQLHLLANHPD
DSFLFPKMLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatggagagccactaccatcccccttcccccctggaggactcggtgctgggc
agccctctctgcaccgatgacgacttcctgggcggcatggaggagctccaggacatctcc
cagtccatggacagcaaccccctcagctcctttgatgtccccgagtaccagtcctccagc
aatggctctgaaggttccactgttctagatgccctgacgccagcatccagcccgtcctcc
gttgtttacggggtggcagcgggacaagaggatttctcatcgtcctcctcatcgctcaat
ctggagtgtcgggtctgtgctgaccgagcctcaggctatcactacggagtccacgcctgc
gagggctgcaagggtttttttcggcggaccatccgtctgaagctggagtatgacaagtgt
gagcgccgctgcaaaatccaaaagaagaaccgcaacaagtgccaatactgccgcttccag
aagtgcctgtcggtgggcatgtcccacaacgccatccgtttcggtcggatgccgcagtca
gagaagctcaagctgaaagcggagatggtgacgggggaccgggaggtgcaggaccctcag
gtagccgaccagaagaccctggcccggcagatctacgaggcctacctcaagaacttcaac
atgaacaaggccaaggctcgaacaattctcacgggcaagaccagcacccctccttttgtc
atccatgacatggagaccctgcagttggcagagcagacgctggtggcaaagatggtgggc
tcagcgggacccctgaaggacaaggaggcagaagttcggattttccactgctgccagtgc
acctcggtggaaaccgtcaccgagctcacagagtttgcaaagtccgtccccgggttctcg
agcctggacctcaacgatcaggtgactcttttgaaatatggagtgtacgaggccctcttc
gccatgctcgcctccagcatgaacaaggatgggctcctggtggcgtacggctcaggcttc
atcacacgggaattcctcaagagcttgcggcggcccttcagtgacatgatggagccaaag
ttccagtttgcaatgaagtttaacgccatggagctggacgacagtgacctggctctgttt
gtggctgccatcatctgctgtggagaccgcccaggcctggtgaacgtgacgcacatcgag
cggatgcaggagagcattgtgcaggtgcttcagctccatctgctggccaatcaccccgac
gactctttcctcttccccaagatgctgcagaaactggccgacctccggcagctggtcact
gagcacgctcagctggtacaagagattaaaaagacagaggacacgtccctgcacccgctc
ctgcaggagatctacagagacatgtactga
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