Pseudochaenichthys georgianus (South Georgia icefish): 117447903
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Entry
117447903 CDS
T09629
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117447903 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117447903 (sin3aa)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
117447903 (sin3aa)
REST complex
117447903 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117447903 (sin3aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
117447903
NCBI-ProteinID:
XP_033940773
LinkDB
All DBs
Position
6:38448317..38479579
Genome browser
AA seq
1282 aa
AA seq
DB search
MKRRLEDQETVFASQQRRLAGNAEAFQHRVLAPAPAPAVYEAVPDNMQPTAGVQYSVPQG
YQVSLLSQVPTVPQNSGGHGHAPSPVVHGGSHHHSPAVQSHGPSVMSGHSHTAAPLASAQ
GQQFQRLKVEDALSYLDQVKLQFGNHPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKG
HPDLIMGFNTFLPPGYKIEVQSNDLVNVTTPGQIHHITPHGISVSNIPLTGAAPLHPPQL
PSAATTTTTTAALPLLTQPTPTKMSKPLQPQALTPSSQSNPSIPAFPSPRSPPMQLHLPL
SGTPTGPPMQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGG
NYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAEAVRNDHGGT
AKKLQLNNKQRPNQNGCPIRRHPTPGATPPIKKKPKLLNLKDSSVAEASKHGVGTESLFF
EKVRKALRSAEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKNFLGYREM
SHIESYPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVS
FPSWSEDSTFVSSKKTQYEENIYRCEDERFELDVVLETNLATIKGLEAVQRKLSRMSAEE
QAKFRLDNTMGGSSEVVHRKAIQRIYGDKAPDILDGLKKNPAVSVPIVLKRLKTKEEEWR
EAQRGFNKIWREQNEKYYLKSLDHQGVNFKQNDTKVLRSKSMLNEIESIYDERQEQASEE
NVTPPTGPQLTLAYEDSQILEDAAALIIHHVKRQAGIQKEDKYKIKQIIYHFVPDMVFSQ
RGELSEVEEEEDEEEEDMDLEEGSKKHNGVPGSRSPSKSKLLFSNTAAQKLRSSDDAYNL
FYVNNNWYIFLRLHQTLCSRLLKLYGQAERQIEDELRERDWEKEVLGLKKEKNDNPAIQL
RLKEPMDIEVEDYYSAFLEMVKNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQSIV
RQLQHIVSDEICVQVTDLYLSESTNSASGGTLSTQASRSSAETLYQRRAEQMSDENCFKV
MFLKNRGQVQLMVELLDTEEDNSDEPMEAERWSDYVGRYLNPDSTTPELREHLAQKPVFL
TRNLRRIRKYQKGREQLDKEACEGGKKSMEKEKMECMFKLNSYKMVYVFKSEDYMYRRTA
LLRAHQSHERVSTRLHQRFQDWVDVWAKEHVTRDMGAETSKWLMGEAREGLLPCTTSRQP
EILHYVNINKYRVKYGPRSKSP
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgactggaggatcaggaaacggtttttgcgtcccagcagcggcgcctcgct
ggcaacgcggaggctttccagcatcgggtcctggcacctgcccctgccccggctgtgtat
gaggccgtgcccgacaacatgcagcccacagcaggcgtccagtactccgtcccccaggga
taccaggtatctctgctctcccaggttcccaccgtgccccagaacagtggcgggcatggg
cacgctccgagcccagtggtccacggggggtcccaccaccacagcccagcagtccagtcc
cacgggccctcagtgatgtcagggcacagccacacagctgctcccctggcctcggcacag
ggccagcagttccagaggctcaaggtggaagatgctctgtcttacttggatcaagtgaaa
ctgcagtttgggaaccatcctcaggtctacaacgactttctggacataatgaaagagttc
aagtctcaaagtattgacaccccgggggtcatcagcagagtgtcacagctcttcaaaggt
caccctgacctcatcatgggcttcaacaccttcctgccgccgggctacaagatcgaggtc
cagagcaacgacctggtcaacgtgaccacgcctggtcagatccaccacatcaccccgcat
ggcatttcagtctcaaacatcccactaacaggagcagcgcccctccatccgccccagctc
ccgtctgctgccaccaccaccaccaccaccgccgctctgccccttctgacgcaacccacc
cccaccaagatgagcaagcctcttcagccccaggcgctgacaccgagcagtcagagcaat
ccgtccatcccggccttcccctctcctcgctccccgcccatgcagctccaccttccactc
agcgggacccccaccgggccacccatgcagaacaaccagcccgtggagttcaaccacgcc
atcaactatgtcaacaagatcaagaaccgctttcagggccagcccgacatctacaaagcc
ttcctggagatcctccacacgtaccagaaggagcagcgtaacgctaaggaggccggtggg
aactacaccccggctctgacggagcaggaggtgtacgctcaggtggcacggctcttcaag
aaccaggaagacctgctctcagagtttggccaattcctgcccgacgccaacagctcagtg
ctgttaagtaagactacagctgagaaggcggaggctgtacggaacgaccatggcggtact
gctaagaagctgcagctcaacaacaaacagcggcccaatcagaacggctgcccgatccgc
cggcatccaactccaggggccaccccccctatcaagaaaaagcccaagttactgaacttg
aaagattcctcggtggcagaggccagcaagcatggagtcgggacagaatctctgttcttt
gagaaggtgcgcaaagccttgcgaagtgcagaggcttacgacaacttcctgcggtgcctg
gtcatcttcaaccaggaggtgatctccagggctgaactggtgcagctggtgctgcctttt
ttaggaaaattcccagagctgttcaactggtttaaaaacttcctgggatatcgggaaatg
tcccacatcgaatcgtatcctaaggaacgggccaccgagggcatcgccatggagatcgat
tatgcttcctgtaagagactaggctccagttacagagctctgcccaaaagctaccagcag
cccaaatgcaccggcagaactccactttgtaaagaggtcttaaatgacacctgggtctcc
ttcccctcctggtctgaggactccacgtttgtcagctccaagaagactcagtacgaggag
aatatctacagatgtgaggacgagcgctttgagttggacgtagtgctggagaccaacctg
gccaccatcaaagggctggaggcggtgcagaggaagttgtcccgcatgtcggcggaggag
caggccaagttccgattggacaacacgatgggcggctcctcggaggtcgtgcaccgtaaa
gccatccagaggatatacggagacaaggcgcccgacatcctggatggcctgaagaagaac
ccggctgtgtctgtgcccatcgtgctaaagaggttaaagactaaggaggaggagtggcgg
gaagcccagcgaggcttcaacaagatctggagggagcagaacgagaagtattacctcaag
tctctcgaccatcagggcgtcaacttcaaacagaacgacaccaaagtgcttcgatccaag
tccatgctgaatgaaatcgaaagcatttatgatgagcgacaggagcaggcgtctgaggag
aacgtgaccccccccacgggccctcagctgaccctggcctacgaggacagtcagatcctg
gaggacgcggcggcgctcatcatccaccatgtcaagaggcaggccggcatccagaaggag
gacaaatacaagatcaagcagatcatctaccacttcgtccccgacatggtgttctctcag
aggggcgagctctccgaggtggaggaggaagaggacgaggaggaagaggacatggatcta
gaggaaggctctaaaaagcacaatggcgtccccggcagccggagcccgtcgaagtccaag
ctgctgttcagcaacacggcggcacagaagctacgcagctccgacgacgcctacaacctt
ttctacgtcaacaacaactggtacatcttcctgcggctgcaccagacgctctgctcgcgg
ctcctcaaactctacggacaggcggagcggcagatcgaggacgagctgcgagaacgagac
tgggagaaggaggtgctgggactgaagaaggagaagaacgacaacccagccatccagctc
agactgaaggagcccatggacattgaggtggaagattactactcggccttcctggagatg
gtgaagaatttgctggatggaaacatggaggcttctcagtatgaggactctctgagggaa
atgttcaccattcacgcttacatcgccttcactatggacaagctcatccaaagcatcgtc
cggcagctccagcacatcgtcagtgatgagatctgtgtccaagtaacggacctctacctc
tcagagagcactaacagcgccagcggaggaacgctctccactcaggcttcaaggagctct
gcagagaccctgtaccagcggagagccgagcagatgtccgacgagaactgcttcaaggtg
atgtttttgaagaatagagggcaggtgcagctgatggtggagctgctcgacacggaggag
gacaactcagacgagcccatggaggctgagcgttggtctgattatgtcggccgctactta
aacccagactccaccacccctgagctgagggagcacctcgctcagaagcccgtgtttctc
accaggaatctgaggcggatcaggaagtaccagaagggccgggagcagctggacaaggag
gcctgcgaaggaggcaagaagtccatggagaaggagaagatggagtgcatgttcaagctc
aactcctacaagatggtgtacgtctttaagtcggaggattacatgtatcgacgcacggcg
ctgctgagagctcaccagtcccacgagcgggtgagcactcggctgcaccagcgcttccag
gactgggtggatgtgtgggccaaagaacacgtgacccgcgacatgggcgccgagaccagt
aagtggctgatgggcgaagctcgcgagggcctcttaccctgcaccaccagccgccagccg
gagatcctgcactatgtgaacatcaacaagtaccgcgtcaaatacggccctcgcagcaag
tcgccgtag
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