Pseudochaenichthys georgianus (South Georgia icefish): 117447926
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Entry
117447926 CDS
T09629
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117447926
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117447926
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pgeo00535
]
117447926
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117447926
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117447926
Proteoglycans [BR:
pgeo00535
]
Cell surface proteoglycans
Others
117447926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Carb_anhydrase
fn3
GUN4_N
PsbJ
Motif
Other DBs
NCBI-GeneID:
117447926
NCBI-ProteinID:
XP_033940834
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All DBs
Position
6:44208534..44311788
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AA seq
1262 aa
AA seq
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METTGCVLLLAALFFFFIILFSQQAEGYAYRNQRKFSEDIDWSYAGTLNQNNWAKKFPSC
SNAKQSPINIEESLAQVKLQFQKLRFEGWETLTAERTTIKNDGKTVAVDVDGDFYVSGGG
LGSKFKVGRIAFHWGRCNASSEGSEHSLDGVKYPLEMQIFCYEAHLYDSLDETIKAGGRI
TALAVLFETSAEDNVNYAAIIDGINSVSRYGKSAEVSPFAPRGLLPNSTDKYFIYNGSLT
SPPCSETVEWIVFKNTAAISDDQLEMFCEVMTMQQAGYVMLMDYLQNNYREQQQQFMGQL
FSSYTGTEELLSPVCSSEPENIQAVPHNLSSLLVTWERPRAVYDASIEKYSVSYRLDNTL
NAAPFIYLTDGDQDVGAIVGDLLANTSYVVQVVAVCTNGLFGRVSDTLTVSMPVDDPESA
MDPDSNEFDEEGNYEPDPSWNEPIQTEDYNLAWIPTNPPKTTTSPSPVLPLPGIRTTTAE
TGRRRTTTDPTVRSTSRGRVLIKSEENARGGTTTSPLEIASPPKTRGSADVSGNAPFYST
TTTKKTLIATSTTPSHPDAKTNRVLEGISPKDSTRVVSTTTPTPPSAKTKGGKGHSSFSS
TTTTPSSRTRDMSSTTSSSFVRAKIDRGLGRPVNEETTTMSAGPGSLPEIKASTSRPSSS
GEAVPSRTTSRGMPRFSSTTTSVGLGGVLLQTTQPMSTGERPSVLPSTSSSSSSPLCDTA
DPSTCLHDPSSSSWPLSASDSQHAATSPQSGKDSAFPSNPMLPASAFPRPSQPPLSGWVT
DPGVGLDDNDSDGDLLSRSSSLTQSSGDLSVFSGTPPLQTLPDPSVASEPSESSWDPSLS
TLSLSPALQPSVFLSSDFTLSGTAPGSSRSFPVAFDDARYAKGSAMESFLPEVSGDGFPL
VSGVDLECDCSLEPSESSSWLHASPHVPLPSSAWASASLELYSSVGVPSASGVGIDDLLR
SPSVAGSDGVSLHRPLLSRISPSSSSSHSLLSDPPISVSAPGVRESWFSASDENPPLQTS
SPPASPFTPTQERPALDISSSASGSALSPYSQEGLDQEWDRVQASGSGDGALTYSNNVTS
TAAPPTTSGSGQSSGDSDDRSSAFYFDSDSGSAVTTEVAGSATPTVPAVPSTSPWSLGRE
EESGSGQGESLYDNETSSDFSIPERTERESEKEEPVADASNSSHESRVGSIREQERKAVV
PLAVISTLTGLGLIVLIGILVYWRTCFQTAHFYIEDSSSPRVITTAVLASDEQTSFPGER
PL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggagactacgggctgcgttctgctcctggctgcactcttcttcttcttcatcatcctc
ttctcacaacaagctgaaggatacgcatacaggaatcaacgcaagttctccgaggacatc
gactggtcgtacgcgggaactttaaatcagaacaactgggccaagaagttcccgtcctgc
agcaacgccaagcaatcccccatcaacatcgaggagagtctggcccaggtgaagcttcag
tttcagaagctccggttcgagggctgggagacgctgacggccgaaaggacaaccatcaag
aacgacgggaagacggtggcggtggacgtggacggagacttctacgtcagcggaggaggt
ctcgggtcaaagttcaaggtggggcgtatcgccttccactgggggcgctgcaacgcgtcc
tcagagggctccgaacacagtctggatggagtcaaataccctctggagatgcagattttc
tgctacgaggcgcatctctacgactctttagatgaaaccataaaggctggaggcaggatc
acagcgctcgccgtgctgtttgagacgagcgctgaagacaacgtgaactacgcggccatc
atagacgggatcaacagcgtgagcagatacggtaagagtgcggaggtttcgcccttcgcc
ccgagaggtctcctgccaaactccacggataaatacttcatttacaacggctctctaacc
tcgcctccctgcagcgagacggtggagtggatcgtcttcaagaacacggcggccatctct
gacgaccagctggagatgttctgcgaggtgatgacgatgcagcaggcggggtacgtgatg
ctgatggattatctgcagaacaactacagagagcagcagcagcagttcatgggtcagctg
ttctcctcctacaccggcaccgaggagctgctctctccagtgtgcagttctgagccggag
aacatccaggcggtgccgcacaacctgagcagcctgctggtgacgtgggaacgtccgagg
gccgtgtacgacgccagcatcgagaaatactccgtcagctaccgcctggacaacactctg
aacgcagcgcccttcatatacctgaccgacggagaccaggacgtgggggcgatagtgggc
gacttgctagcgaacaccagctacgtggtgcaggtggtggcggtgtgcaccaacggtctg
ttcggacgtgtgagcgacacgctgaccgtctccatgcccgtagacgaccccgaaagtgca
atggatccggattcaaatgaatttgacgaagagggcaactatgaacccgatccgtcttgg
aatgaacccatccaaactgaggattacaatctggcctggattcctacaaacccgccaaag
accacgacttctccatctcctgttttaccgctccctggcatcagaaccacgacagcagaa
actggtcggaggagaaccacaactgatcccacggtcagatccacttcgcgtggtcgagtc
ctaatcaaatctgaagagaacgcacgtggcggtaccaccacaagtccattagagatcgca
tcgcccccgaaaaccaggggaagtgccgacgttagtggcaatgctcccttttactccacg
acaaccaccaagaaaaccttaattgccacctccactactccgtcgcaccccgatgcaaag
acgaatcgtgttctcgaaggcatcagtccaaaagactccacaagagttgttagtaccact
actcctacacccccgagtgcaaagacaaaaggcggtaaaggccattcttcattcagctcc
accacgaccacaccgagttctcgtacccgcgacatgagcagcacaacgtcatcgtccttc
gtccgggccaagatcgaccgaggcctggggcgtcccgtaaatgaagaaaccaccaccatg
tccgccggacccggaagtcttccagagatcaaagcttcaacttctcgaccgtcctcttcc
ggcgaagccgttccaagtaggaccacaagtcgtggaatgcctcgtttttcatccacgaca
acctctgtggggttgggtggcgttctcttgcagaccacacagccgatgtccactggtgag
cgtccttctgtcctcccttccacctcttcctcctcctcttcccctctatgtgacacagcg
gacccctccacctgcctgcatgacccttcctcctcgtcctggcctttgtctgcgtcggac
tcccagcatgccgccacctctccgcagtccggcaaagattcggcttttccttcaaaccct
atgctccctgcttccgcctttcctcgcccctcacagccccccctgtctggttgggtgact
gaccctggtgttgggttagatgataatgatagcgatggtgatttgttgtccaggtcttcc
tctttgacgcagtcctcgggtgacctttcagtctttagcggtacccctcctttacaaacg
ttgccggatccgtctgtggcctctgaaccgtccgaatcctcctgggatccgtctctctca
acgctctctctgtctcccgccctccagccttcagttttcctctctagcgacttcaccctt
tccggcacagctccggggtcgtcccgctctttcccagtcgcgtttgatgatgcaaggtac
gccaaggggagcgcgatggagtcttttctccccgaggttagcggtgatgggtttccctta
gttagcggcgtggacttggagtgcgactgttctctggagccttcggagtcctcgtcctgg
ttgcatgcatctcctcacgtccccctgccgtcctccgcctgggcgtctgctagcttagag
ctttactctagcgtaggtgtcccttcagcctctggtgttggtatagacgatcttctacgt
tctccgtccgtagcgggatctgatggtgtgtccttacatcggcctctcctttcccgtatc
tcgccgtcatcgtcctcttcacactccctccttagtgacccgcccatttctgtttcagcc
cctggcgtcagggagtcctggttctccgcatcggacgagaaccctcccctacaaacgtcc
tcacccccagcctcccccttcacccccacccaagaaagaccggctttagacattagcagc
agtgcctccggttcggccctgtccccctactcccaggagggcttagatcaggagtgggac
agggttcaagcctcgggatctggagacggcgcgttgacttattcaaacaacgttactagc
accgcagccccgccaacaacctctgggtccggccagtcctcgggtgattcggacgatcgc
tcctctgcgttttattttgatagcgacagtggcagtgctgtcactacggaggtagcaggc
tcagcgacaccaaccgttcctgctgtaccctcgacttcaccctggtcgctgggcagggag
gaggagagcggctcgggtcagggggaaagcctgtacgacaacgagacgtcctcagacttc
agtatccccgagcgcacagaaagagagtccgagaaggaggagccagtcgcagacgccagt
aacagcagccatgagtccagagtgggttcgatccgggagcaagagaggaaagctgtggtt
cctctggccgtcatctccacgctgaccggcctgggactcatcgtgctcatcgggatcctc
gtctactggaggacctgttttcagacggctcacttctacatcgaagacagctcatcaccc
agagtcatcactacagctgtattagcatctgacgagcagacgtcttttcccggtgaaaga
cctttgtga
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